Literature DB >> 24011050

Site-directed mutagenesis.

Julia Bachman1.   

Abstract

Site-directed mutagenesis is a PCR-based method to mutate specified nucleotides of a sequence within a plasmid vector. This technique allows one to study the relative importance of a particular amino acid for protein structure and function. Typical mutations are designed to disrupt or map protein-protein interactions, mimic or block posttranslational modifications, or to silence enzymatic activity. Alternatively, noncoding changes are often used to generate rescue constructs that are resistant to knockdown via RNAi.
Copyright © 2013 Elsevier Inc. All rights reserved.

Keywords:  Chemically competent E. coli; Colony screening; DNA polymerase; PCR amplification; Plasmid DNA; Site-directed mutagenesis

Mesh:

Substances:

Year:  2013        PMID: 24011050     DOI: 10.1016/B978-0-12-418687-3.00019-7

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  14 in total

1.  Various Evolutionary Trajectories Lead to Loss of the Tobramycin-Potentiating Activity of the Quorum-Sensing Inhibitor Baicalin Hydrate in Burkholderia cenocepacia Biofilms.

Authors:  Andrea Sass; Lisa Slachmuylders; Heleen Van Acker; Ian Vandenbussche; Lisa Ostyn; Mona Bové; Aurélie Crabbé; Laurent R Chiarelli; Silvia Buroni; Filip Van Nieuwerburgh; Emmanuel Abatih; Tom Coenye
Journal:  Antimicrob Agents Chemother       Date:  2019-03-27       Impact factor: 5.191

2.  Bridge Helix of Cas9 Modulates Target DNA Cleavage and Mismatch Tolerance.

Authors:  Kesavan Babu; Nadia Amrani; Wei Jiang; S D Yogesha; Richard Nguyen; Peter Z Qin; Rakhi Rajan
Journal:  Biochemistry       Date:  2019-03-27       Impact factor: 3.162

3.  Coordinated Actions of Cas9 HNH and RuvC Nuclease Domains Are Regulated by the Bridge Helix and the Target DNA Sequence.

Authors:  Kesavan Babu; Venkatesan Kathiresan; Pratibha Kumari; Sydney Newsom; Hari Priya Parameshwaran; Xiongping Chen; Jin Liu; Peter Z Qin; Rakhi Rajan
Journal:  Biochemistry       Date:  2021-11-10       Impact factor: 3.162

4.  Multiple Viral Protein Genome-Linked Proteins Compensate for Viral Translation in a Positive-Sense Single-Stranded RNA Virus Infection.

Authors:  Reid Warsaba; Nikolay Stoynov; Kyung-Mee Moon; Stephane Flibotte; Leonard Foster; Eric Jan
Journal:  J Virol       Date:  2022-08-22       Impact factor: 6.549

5.  Recent Advances in Machine Learning Variant Effect Prediction Tools for Protein Engineering.

Authors:  Jesse Horne; Diwakar Shukla
Journal:  Ind Eng Chem Res       Date:  2022-04-06       Impact factor: 4.326

6.  Soluble Expression and Catalytic Properties of Codon-Optimized Recombinant Bromelain from MD2 Pineapple in Escherichia coli.

Authors:  Rafida Razali; Cahyo Budiman; Khairul Azfar Kamaruzaman; Vijay Kumar Subbiah
Journal:  Protein J       Date:  2021-03-13       Impact factor: 2.371

7.  The bridge helix of Cas12a imparts selectivity in cis-DNA cleavage and regulates trans-DNA cleavage.

Authors:  Hari Priya Parameshwaran; Kesavan Babu; Christine Tran; Kevin Guan; Aleique Allen; Venkatesan Kathiresan; Peter Z Qin; Rakhi Rajan
Journal:  FEBS Lett       Date:  2021-02-28       Impact factor: 4.124

8.  Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.

Authors:  Chelsy Chesterman; Eddy Arnold
Journal:  Structure       Date:  2021-02-25       Impact factor: 5.871

9.  Interaction between the type 4 pili machinery and a diguanylate cyclase fine-tune c-di-GMP levels during early biofilm formation.

Authors:  Shanice S Webster; Calvin K Lee; William C Schmidt; Gerard C L Wong; George A O'Toole
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-29       Impact factor: 11.205

10.  Investigating the Mechanism of Action of Diketopiperazines Inhibitors of the Burkholderia cenocepacia Quorum Sensing Synthase CepI: A Site-Directed Mutagenesis Study.

Authors:  Silvia Buroni; Viola C Scoffone; Marco Fumagalli; Vadim Makarov; Maddalena Cagnone; Gabriele Trespidi; Edda De Rossi; Federico Forneris; Giovanna Riccardi; Laurent R Chiarelli
Journal:  Front Pharmacol       Date:  2018-07-31       Impact factor: 5.810

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.