Literature DB >> 24011046

Preparation of fragment libraries for next-generation sequencing on the applied biosystems SOLiD platform.

Srinivasan Yegnasubramanian1.   

Abstract

The primary purpose of this protocol is to prepare genomic DNA libraries that can then be analyzed by massively parallel next-generation sequencing on the Applied Biosystems SOLiD platform. This protocol can be adapted to next-generation sequencing workflows to ultimately generate up to 1 billion 50 bp sequence tags from the ends of each of the DNA molecules in the library in a single next-generation sequencing run.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Adaptor ligation; Amplification; DNA fragments; End-Repair of fragmented DNA; Integrated DNA Technologies (IDT); Invitrogen E-Gel system; Next-generation sequencing

Mesh:

Substances:

Year:  2013        PMID: 24011046      PMCID: PMC3991121          DOI: 10.1016/B978-0-12-418687-3.00015-X

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  1 in total

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Authors:  Michael L Metzker
Journal:  Nat Rev Genet       Date:  2009-12-08       Impact factor: 53.242

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1.  Spherical nucleic acids as a divergent platform for synthesizing RNA-nanoparticle conjugates through enzymatic ligation.

Authors:  Jessica L Rouge; Liangliang Hao; Xiaochen A Wu; William E Briley; Chad A Mirkin
Journal:  ACS Nano       Date:  2014-08-21       Impact factor: 15.881

Review 2.  Unraveling long non-coding RNAs through analysis of high-throughput RNA-sequencing data.

Authors:  Rashmi Tripathi; Pavan Chakraborty; Pritish Kumar Varadwaj
Journal:  Noncoding RNA Res       Date:  2017-06-24
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