Literature DB >> 24010659

Coexistence of fluid and crystalline phases of proteins in photosynthetic membranes.

Anna R Schneider1, Phillip L Geissler.   

Abstract

Photosystem II (PSII) and its associated light-harvesting complex II (LHCII) are highly concentrated in the stacked grana regions of photosynthetic thylakoid membranes. PSII-LHCII supercomplexes can be arranged in disordered packings, ordered arrays, or mixtures thereof. The physical driving forces underlying array formation are unknown, complicating attempts to determine a possible functional role for arrays in regulating light harvesting or energy conversion efficiency. Here, we introduce a coarse-grained model of protein interactions in coupled photosynthetic membranes, focusing on just two particle types that feature simple shapes and potential energies motivated by structural studies. Reporting on computer simulations of the model's equilibrium fluctuations, we demonstrate its success in reproducing diverse structural features observed in experiments, including extended PSII-LHCII arrays. Free energy calculations reveal that the appearance of arrays marks a phase transition from the disordered fluid state to a system-spanning crystal. The predicted region of fluid-crystal coexistence is broad, encompassing much of the physiologically relevant parameter regime; we propose experiments that could test this prediction. Our results suggest that grana membranes lie at or near phase coexistence, conferring significant structural and functional flexibility to this densely packed membrane protein system.
Copyright © 2013 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24010659      PMCID: PMC3762348          DOI: 10.1016/j.bpj.2013.06.052

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  61 in total

1.  Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.

Authors:  Nobuo Kamiya; Jian-Ren Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

Review 2.  Composition, architecture and dynamics of the photosynthetic apparatus in higher plants.

Authors:  Reinat Nevo; Dana Charuvi; Onie Tsabari; Ziv Reich
Journal:  Plant J       Date:  2012-04       Impact factor: 6.417

3.  Arrangement of photosystem II and ATP synthase in chloroplast membranes of spinach and pea.

Authors:  Bertram Daum; Daniela Nicastro; Jotham Austin; J Richard McIntosh; Werner Kühlbrandt
Journal:  Plant Cell       Date:  2010-04-13       Impact factor: 11.277

4.  Refinement of the structural model for the Photosystem II supercomplex of higher plants.

Authors:  Jon Nield; James Barber
Journal:  Biochim Biophys Acta       Date:  2006-04-19

5.  Lack of the light-harvesting complex CP24 affects the structure and function of the grana membranes of higher plant chloroplasts.

Authors:  László Kovács; Jakob Damkjaer; Sami Kereïche; Cristian Ilioaia; Alexander V Ruban; Egbert J Boekema; Stefan Jansson; Peter Horton
Journal:  Plant Cell       Date:  2006-11-17       Impact factor: 11.277

6.  Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å.

Authors:  Yasufumi Umena; Keisuke Kawakami; Jian-Ren Shen; Nobuo Kamiya
Journal:  Nature       Date:  2011-04-17       Impact factor: 49.962

7.  Freezing of two-dimensional hard disks.

Authors:  Adrián Huerta; Douglas Henderson; Andrij Trokhymchuk
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-12-11

8.  Live-cell imaging of photosystem II antenna dissociation during state transitions.

Authors:  Masakazu Iwai; Makio Yokono; Noriko Inada; Jun Minagawa
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-22       Impact factor: 11.205

Review 9.  Electron tomography of plant thylakoid membranes.

Authors:  Bertram Daum; Werner Kühlbrandt
Journal:  J Exp Bot       Date:  2011-03-25       Impact factor: 6.992

10.  High-light vs. low-light: effect of light acclimation on photosystem II composition and organization in Arabidopsis thaliana.

Authors:  Roman Kouřil; Emilie Wientjes; Jelle B Bultema; Roberta Croce; Egbert J Boekema
Journal:  Biochim Biophys Acta       Date:  2012-12-27
View more
  11 in total

1.  Multiscale model of light harvesting by photosystem II in plants.

Authors:  Kapil Amarnath; Doran I G Bennett; Anna R Schneider; Graham R Fleming
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

2.  Modeling the Role of LHCII-LHCII, PSII-LHCII, and PSI-LHCII Interactions in State Transitions.

Authors:  William H J Wood; Matthew P Johnson
Journal:  Biophys J       Date:  2020-06-12       Impact factor: 4.033

3.  Lattice Models for Protein Organization throughout Thylakoid Membrane Stacks.

Authors:  Andreana M Rosnik; Phillip L Geissler
Journal:  Biophys J       Date:  2020-05-01       Impact factor: 4.033

Review 4.  Molecular dynamics simulations in photosynthesis.

Authors:  Nicoletta Liguori; Roberta Croce; Siewert J Marrink; Sebastian Thallmair
Journal:  Photosynth Res       Date:  2020-04-15       Impact factor: 3.573

5.  The Use of Contact Mode Atomic Force Microscopy in Aqueous Medium for Structural Analysis of Spinach Photosynthetic Complexes.

Authors:  Witchukorn Phuthong; Zubin Huang; Tyler M Wittkopp; Kinga Sznee; Mark L Heinnickel; Jan P Dekker; Raoul N Frese; Fritz B Prinz; Arthur R Grossman
Journal:  Plant Physiol       Date:  2015-07-28       Impact factor: 8.340

6.  Temperature-dependent regulation of electron transport and ATP synthesis in chloroplasts in vitro and in silico.

Authors:  Alexander N Tikhonov; Alexey V Vershubskii
Journal:  Photosynth Res       Date:  2020-08-11       Impact factor: 3.573

Review 7.  Models and measurements of energy-dependent quenching.

Authors:  Julia Zaks; Kapil Amarnath; Emily J Sylak-Glassman; Graham R Fleming
Journal:  Photosynth Res       Date:  2013-06-23       Impact factor: 3.573

8.  Energy-dependent quenching adjusts the excitation diffusion length to regulate photosynthetic light harvesting.

Authors:  Doran I G Bennett; Graham R Fleming; Kapil Amarnath
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-20       Impact factor: 11.205

Review 9.  Coarse-grained computer simulation of dynamics in thylakoid membranes: methods and opportunities.

Authors:  Anna R Schneider; Phillip L Geissler
Journal:  Front Plant Sci       Date:  2014-01-21       Impact factor: 5.753

10.  Atomic force microscopy of photosystem II and its unit cell clustering quantitatively delineate the mesoscale variability in Arabidopsis thylakoids.

Authors:  Bibiana Onoa; Anna R Schneider; Matthew D Brooks; Patricia Grob; Eva Nogales; Phillip L Geissler; Krishna K Niyogi; Carlos Bustamante
Journal:  PLoS One       Date:  2014-07-09       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.