Literature DB >> 24008231

Development and application of MLVA methods as a tool for inter-laboratory surveillance.

C A Nadon1, E Trees, L K Ng, E Møller Nielsen, A Reimer, N Maxwell, K A Kubota, P Gerner-Smidt.   

Abstract

Multiple-locus variable-number of tandem-repeats analysis (MLVA) has emerged as a valuable method for subtyping bacterial pathogens and has been adopted in many countries as a critical component of their laboratory-based surveillance. Lack of harmonisation and standardisation of the method, however, has made comparison of results generated in different laboratories difficult, if not impossible, and has therefore hampered its use in international surveillance. This paper proposes an international consensus on the development, validation, nomenclature and quality control for MLVA used for molecular surveillance and outbreak detection based on a review of the current state of knowledge.

Entities:  

Mesh:

Year:  2013        PMID: 24008231      PMCID: PMC5667538          DOI: 10.2807/1560-7917.es2013.18.35.20565

Source DB:  PubMed          Journal:  Euro Surveill        ISSN: 1025-496X


  33 in total

1.  Second generation subtyping: a proposed PulseNet protocol for multiple-locus variable-number tandem repeat analysis of Shiga toxin-producing Escherichia coli O157 (STEC O157).

Authors:  Eija Hyytiä-Trees; Sandra C Smole; Patricia A Fields; Bala Swaminathan; Efrain M Ribot
Journal:  Foodborne Pathog Dis       Date:  2006       Impact factor: 3.171

2.  Comparison of multiple-locus variable-number tandem repeat analysis, pulsed-field gel electrophoresis, and phage typing for subtype analysis of Salmonella enterica serotype Enteritidis.

Authors:  D Boxrud; K Pederson-Gulrud; J Wotton; C Medus; E Lyszkowicz; J Besser; J M Bartkus
Journal:  J Clin Microbiol       Date:  2006-12-06       Impact factor: 5.948

3.  Tandem repeats finder: a program to analyze DNA sequences.

Authors:  G Benson
Journal:  Nucleic Acids Res       Date:  1999-01-15       Impact factor: 16.971

4.  Development and evaluation of multilocus variable number tandem repeat analysis for fine typing and phylogenetic analysis of Salmonella enterica serovar Typhimurium.

Authors:  Chien-Shun Chiou; Chung-Sheng Hung; Mia Torpdahl; Haruo Watanabe; Sheng Kai Tung; Jun Terajima; Shiu-Yun Liang; You-Wun Wang
Journal:  Int J Food Microbiol       Date:  2010-06-08       Impact factor: 5.277

5.  Application of a multilocus variable number of tandem repeats analysis to regional outbreak surveillance of Enterohemorrhagic Escherichia coli O157:H7 infections.

Authors:  Takayuki Konno; Jun Yatsuyanagi; Shioko Saito
Journal:  Jpn J Infect Dis       Date:  2011       Impact factor: 1.362

6.  Standardisation of multilocus variable-number tandem-repeat analysis (MLVA) for subtyping of Salmonella enterica serovar Enteritidis.

Authors:  K L Hopkins; T M Peters; E de Pinna; J Wain
Journal:  Euro Surveill       Date:  2011-08-11

7.  Highly diverse variable number tandem repeat loci in the E. coli O157:H7 and O55:H7 genomes for high-resolution molecular typing.

Authors:  C Keys; S Kemper; P Keim
Journal:  J Appl Microbiol       Date:  2005       Impact factor: 3.772

8.  Multilocus sequence typing reveals a lack of diversity among Escherichia coli O157:H7 isolates that are distinct by pulsed-field gel electrophoresis.

Authors:  Anna C Noller; M Catherine McEllistrem; O Colin Stine; J Glenn Morris; David J Boxrud; Bruce Dixon; Lee H Harrison
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

9.  Multiple-Locus Variable-Number Tandem-Repeats Analysis of Escherichia coli O157 using PCR multiplexing and multi-colored capillary electrophoresis.

Authors:  Bjørn-Arne Lindstedt; Traute Vardund; Georg Kapperud
Journal:  J Microbiol Methods       Date:  2004-08       Impact factor: 2.363

10.  Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis.

Authors:  Bjørn-Arne Lindstedt; Traute Vardund; Lena Aas; Georg Kapperud
Journal:  J Microbiol Methods       Date:  2004-11       Impact factor: 2.363

View more
  27 in total

1.  MLVA for Salmonella enterica subsp. enterica Serovar Dublin: Development of a Method Suitable for Inter-Laboratory Surveillance and Application in the Context of a Raw Milk Cheese Outbreak in France in 2012.

Authors:  Marie-Léone Vignaud; Emeline Cherchame; Muriel Marault; Emilie Chaing; Simon Le Hello; Valerie Michel; Nathalie Jourdan-Da Silva; Renaud Lailler; Anne Brisabois; Sabrina Cadel-Six
Journal:  Front Microbiol       Date:  2017-02-27       Impact factor: 5.640

Review 2.  Clostridium difficile infection.

Authors:  Wiep Klaas Smits; Dena Lyras; D Borden Lacy; Mark H Wilcox; Ed J Kuijper
Journal:  Nat Rev Dis Primers       Date:  2016-04-07       Impact factor: 52.329

3.  Molecular epidemiology of cases of Mycoplasma californicum infection in Japan.

Authors:  Eiji Hata; Kan-Ichiro Suzuki; Hideki Hanyu; Megumi Itoh; Hidetoshi Higuchi; Hideki Kobayashi
Journal:  Appl Environ Microbiol       Date:  2014-10-03       Impact factor: 4.792

4.  ClassTR: Classifying Within-Host Heterogeneity Based on Tandem Repeats with Application to Mycobacterium tuberculosis Infections.

Authors:  Leonid Chindelevitch; Caroline Colijn; Prashini Moodley; Douglas Wilson; Ted Cohen
Journal:  PLoS Comput Biol       Date:  2016-02-01       Impact factor: 4.475

5.  Multiple-locus variable-number tandem repeat analysis for strain discrimination of non-O157 Shiga toxin-producing Escherichia coli.

Authors:  Chris Timmons; Eija Trees; Efrain M Ribot; Peter Gerner-Smidt; Patti LaFon; Sung Im; Li Maria Ma
Journal:  J Microbiol Methods       Date:  2016-04-09       Impact factor: 2.363

6.  Inter-laboratory comparison of multi-locus variable-number tandem repeat analysis (MLVA) for verocytotoxin-producing Escherichia coli O157 to facilitate data sharing.

Authors:  A Holmes; N Perry; G Willshaw; M Hanson; L Allison
Journal:  Epidemiol Infect       Date:  2014-04-04       Impact factor: 4.434

7.  Development of a framework for genotyping bovine-derived Cryptosporidium parvum, using a multilocus fragment typing tool.

Authors:  Emily J Hotchkiss; Janice A Gilray; Marnie L Brennan; Robert M Christley; Liam J Morrison; Nicholas N Jonsson; Elizabeth A Innes; Frank Katzer
Journal:  Parasit Vectors       Date:  2015-10-01       Impact factor: 3.876

8.  Subtyping β-lactamase-producing Escherichia coli strains isolated from patients with UTI by MLVA and PFGE methods.

Authors:  Alireza Dolatyar Dehkharghani; Setareh Haghighat; Marjan Rahnamaye Farzami; Masoumeh Douraghi; Mohammad Rahbar
Journal:  Iran J Basic Med Sci       Date:  2021-04       Impact factor: 2.699

9.  International Mycoplasma pneumoniae typing study: interpretation of M. pneumoniae multilocus variable-number tandem-repeat analysis.

Authors:  V J Chalker; S Pereyre; R Dumke; J Winchell; P Khosla; H Sun; C Yan; C Vink; C Bébéar
Journal:  New Microbes New Infect       Date:  2015-05-23

10.  Multilocus Variable-Number Tandem-Repeat Analysis for Geno-typing of Escherichia coli Strains Isolated from Hospital Wastewater, Tehran, Iran.

Authors:  Omid Farahani; Reza Ranjbar; Sahar Honarmand Jahromy; Bahareh Arabzadeh
Journal:  Iran J Public Health       Date:  2020-12       Impact factor: 1.429

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.