Literature DB >> 24006975

Mimicking photoisomerisation of azo-materials by a force field switch derived from nonadiabatic ab initio simulations: application to photoswitchable helical foldamers in solution.

Marcus Böckmann1, Sebastian Braun, Nikos L Doltsinis, Dominik Marx.   

Abstract

A force field to induce isomerisation of photoswitchable azobenzene groups embedded in molecular materials has been developed in the framework of force field molecular dynamics simulations. A molecular mechanics switching potential has been tuned so as to reproduce both the correct photoisomerisation timescale and mechanism that has been generated by reference nonadiabatic ab initio molecular dynamics. As a first application, we present a force field molecular dynamics study of a prototype photoswitchable foldamer in acetonitrile as solvent. Our analyses reveal that the photoisomerisation of the azobenzene unit embedded in the foldamer occurs via the so-called NN-twist mechanism, and that there exist several distinct unfolding channels for the helix that could be exploited in novel applications of photoresponsive materials.

Entities:  

Year:  2013        PMID: 24006975     DOI: 10.1063/1.4818489

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  4 in total

1.  Azobenzene photoisomerization-induced destabilization of B-DNA.

Authors:  Mithun Biswas; Irene Burghardt
Journal:  Biophys J       Date:  2014-08-19       Impact factor: 4.033

2.  Photoisomerization of Arylazopyrazole Photoswitches: Stereospecific Excited-State Relaxation.

Authors:  Ya-Ting Wang; Xiang-Yang Liu; Ganglong Cui; Wei-Hai Fang; Walter Thiel
Journal:  Angew Chem Int Ed Engl       Date:  2016-10-06       Impact factor: 15.336

3.  Azobenzene as a photoregulator covalently attached to RNA: a quantum mechanics/molecular mechanics-surface hopping dynamics study.

Authors:  Padmabati Mondal; Giovanni Granucci; Dominique Rastädter; Maurizio Persico; Irene Burghardt
Journal:  Chem Sci       Date:  2018-04-27       Impact factor: 9.825

4.  Cyclic Photoisomerization of Azobenzene in Atomistic Simulations: Modeling the Effect of Light on Columnar Aggregates of Azo Stars.

Authors:  Markus Koch; Marina Saphiannikova; Olga Guskova
Journal:  Molecules       Date:  2021-12-18       Impact factor: 4.411

  4 in total

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