Literature DB >> 24005667

Identification of amino acids conferring chain length substrate specificities on fatty alcohol-forming reductases FAR5 and FAR8 from Arabidopsis thaliana.

Micaëla G Chacón1, Ashley E Fournier, Frances Tran, Franziska Dittrich-Domergue, Ian P Pulsifer, Frédéric Domergue, Owen Rowland.   

Abstract

Fatty alcohols play a variety of biological roles in all kingdoms of life. Fatty acyl reductase (FAR) enzymes catalyze the reduction of fatty acyl-coenzyme A (CoA) or fatty acyl-acyl carrier protein substrates to primary fatty alcohols. FAR enzymes have distinct substrate specificities with regard to chain length and degree of saturation. FAR5 (At3g44550) and FAR8 (At3g44560) from Arabidopsis thaliana are 85% identical at the amino acid level and are of equal length, but they possess distinct specificities for 18:0 or 16:0 acyl chain length, respectively. We used Saccharomyces cerevisiae as a heterologous expression system to assess FAR substrate specificity determinants. We identified individual amino acids that affect protein levels or 16:0-CoA versus 18:0-CoA specificity by expressing in yeast FAR5 and FAR8 domain-swap chimeras and site-specific mutants. We found that a threonine at position 347 and a serine at position 363 were important for high FAR5 and FAR8 protein accumulation in yeast and thus are likely important for protein folding and stability. Amino acids at positions 355 and 377 were important for dictating 16:0-CoA versus 18:0-CoA chain length specificity. Simultaneously converting alanine 355 and valine 377 of FAR5 to the corresponding FAR8 residues, leucine and methionine, respectively, almost fully converted FAR5 specificity from 18:0-CoA to 16:0-CoA. The reciprocal amino acid conversions, L355A and M377V, made in the active FAR8-S363P mutant background converted its specificity from 16:0-CoA to 18:0-CoA. This study is an important advancement in the engineering of highly active FAR proteins with desired specificities for the production of fatty alcohols with industrial value.

Entities:  

Keywords:  Enzyme Structure; Fatty Acyl Reductase; Fatty Alcohol; Lipid Metabolism; Plant Biochemistry; Protein Engineering; Site-directed Mutagenesis

Mesh:

Substances:

Year:  2013        PMID: 24005667      PMCID: PMC3798499          DOI: 10.1074/jbc.M113.499715

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  31 in total

1.  Biochemical characterization of a chloroplast localized fatty acid reductase from Arabidopsis thaliana.

Authors:  Thuy T P Doan; Frédéric Domergue; Ashley E Fournier; Sollapura J Vishwanath; Owen Rowland; Patrick Moreau; Craig C Wood; Anders S Carlsson; Mats Hamberg; Per Hofvander
Journal:  Biochim Biophys Acta       Date:  2011-11-30

2.  Male Sterile2 encodes a plastid-localized fatty acyl carrier protein reductase required for pollen exine development in Arabidopsis.

Authors:  Weiwei Chen; Xiao-Hong Yu; Kaisi Zhang; Jianxin Shi; Sheron De Oliveira; Lukas Schreiber; John Shanklin; Dabing Zhang
Journal:  Plant Physiol       Date:  2011-08-03       Impact factor: 8.340

3.  Allelic variation in a fatty-acyl reductase gene causes divergence in moth sex pheromones.

Authors:  Jean-Marc Lassance; Astrid T Groot; Marjorie A Liénard; Binu Antony; Christin Borgwardt; Fredrik Andersson; Erik Hedenström; David G Heckel; Christer Löfstedt
Journal:  Nature       Date:  2010-06-30       Impact factor: 49.962

4.  A fatty acyl-CoA reductase highly expressed in the head of honey bee (Apis mellifera) involves biosynthesis of a wide range of aliphatic fatty alcohols.

Authors:  Prapapan Teerawanichpan; Albert J Robertson; Xiao Qiu
Journal:  Insect Biochem Mol Biol       Date:  2010-06-11       Impact factor: 4.714

5.  Arabidopsis long-chain acyl-CoA synthetase 1 (LACS1), LACS2, and LACS3 facilitate fatty acid uptake in yeast.

Authors:  Ian P Pulsifer; Sabine Kluge; Owen Rowland
Journal:  Plant Physiol Biochem       Date:  2011-10-18       Impact factor: 4.270

6.  A distinct type of glycerol-3-phosphate acyltransferase with sn-2 preference and phosphatase activity producing 2-monoacylglycerol.

Authors:  Weili Yang; Mike Pollard; Yonghua Li-Beisson; Fred Beisson; Michael Feig; John Ohlrogge
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-15       Impact factor: 11.205

7.  Purification of a jojoba embryo fatty acyl-coenzyme A reductase and expression of its cDNA in high erucic acid rapeseed.

Authors:  J G Metz; M R Pollard; L Anderson; T R Hayes; M W Lassner
Journal:  Plant Physiol       Date:  2000-03       Impact factor: 8.340

8.  Identification of an Arabidopsis fatty alcohol:caffeoyl-Coenzyme A acyltransferase required for the synthesis of alkyl hydroxycinnamates in root waxes.

Authors:  Dylan K Kosma; Isabel Molina; John B Ohlrogge; Mike Pollard
Journal:  Plant Physiol       Date:  2012-07-13       Impact factor: 8.340

Review 9.  Plant fatty acyl reductases: enzymes generating fatty alcohols for protective layers with potential for industrial applications.

Authors:  Owen Rowland; Frédéric Domergue
Journal:  Plant Sci       Date:  2012-05-16       Impact factor: 4.729

10.  Fatty acyl-CoA reductases of birds.

Authors:  Janine Hellenbrand; Eva-Maria Biester; Jens Gruber; Mats Hamberg; Margrit Frentzen
Journal:  BMC Biochem       Date:  2011-12-12       Impact factor: 4.059

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  8 in total

1.  Evolution and molecular basis of substrate specificity in a 3-ketoacyl-CoA synthase gene cluster from Populus trichocarpa.

Authors:  Jeff Y Chen; Arishba Mumtaz; Eliana Gonzales-Vigil
Journal:  J Biol Chem       Date:  2022-09-14       Impact factor: 5.486

Review 2.  The production of wax esters in transgenic plants: 
towards a sustainable source of bio-lubricants.

Authors:  Frédéric Domergue; Magdalena Miklaszewska
Journal:  J Exp Bot       Date:  2022-05-13       Impact factor: 7.298

3.  The bifunctional protein TtFARAT from Tetrahymena thermophila catalyzes the formation of both precursors required to initiate ether lipid biosynthesis.

Authors:  Franziska Dittrich-Domergue; Jérôme Joubès; Patrick Moreau; René Lessire; Sten Stymne; Frédéric Domergue
Journal:  J Biol Chem       Date:  2014-06-10       Impact factor: 5.157

4.  Molecular Characterization of Two Fatty Acyl-CoA Reductase Genes From Phenacoccus solenopsis (Hemiptera: Pseudococcidae).

Authors:  Xiaolong Li; Tianxiang Zheng; Xiaowen Zheng; Na Han; Xuexin Chen; Dayu Zhang
Journal:  J Insect Sci       Date:  2016-06-07       Impact factor: 1.857

5.  Five Fatty Acyl-Coenzyme A Reductases Are Involved in the Biosynthesis of Primary Alcohols in Aegilops tauschii Leaves.

Authors:  Meiling Wang; Hongqi Wu; Jing Xu; Chunlian Li; Yong Wang; Zhonghua Wang
Journal:  Front Plant Sci       Date:  2017-06-12       Impact factor: 5.753

6.  Birth-and-Death Evolution of the Fatty Acyl-CoA Reductase (FAR) Gene Family and Diversification of Cuticular Hydrocarbon Synthesis in Drosophila.

Authors:  Cédric Finet; Kailey Slavik; Jian Pu; Sean B Carroll; Henry Chung
Journal:  Genome Biol Evol       Date:  2019-06-01       Impact factor: 3.416

7.  Three TaFAR genes function in the biosynthesis of primary alcohols and the response to abiotic stresses in Triticum aestivum.

Authors:  Meiling Wang; Yong Wang; Hongqi Wu; Jing Xu; Tingting Li; Daniela Hegebarth; Reinhard Jetter; Letian Chen; Zhonghua Wang
Journal:  Sci Rep       Date:  2016-04-26       Impact factor: 4.379

8.  Direct production of fatty alcohols from glucose using engineered strains of Yarrowia lipolytica.

Authors:  Lauren T Cordova; Jonathan Butler; Hal S Alper
Journal:  Metab Eng Commun       Date:  2019-10-31
  8 in total

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