| Literature DB >> 24002600 |
N Snoeren1, B L Emmink, M J G Koerkamp, S R van Hooff, J A C M Goos, W J van Houdt, M de Wit, A M Prins, S R Piersma, T V Pham, E J Belt, H Bril, H B Stockmann, G A Meijer, R van Hillegersberg, F C Holstege, C R Jimenez, R J A Fijneman, O W Kranenburg, I H M Borel Rinkes.
Abstract
BACKGROUND: Little is known about the factors that drive metastasis formation in colorectal cancer (CRC). Here, we set out to identify genes and proteins in patients with colorectal liver metastases that correlate with early disease recurrence. Such factors may predict a propensity for metastasis in earlier stages of CRC.Entities:
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Year: 2013 PMID: 24002600 PMCID: PMC3776998 DOI: 10.1038/bjc.2013.489
Source DB: PubMed Journal: Br J Cancer ISSN: 0007-0920 Impact factor: 7.640
Figure 1Study workflow
Immunohistochemical evaluation of nuclear and cytoplasmic staining in central and peripheral tumour cores
| High | 3+ | >10% |
| | 2+ | >50% |
| Low | 3+ | <10% |
| 2+ | <50% | |
| 1+ | All | |
| | Negative | — |
| Cytoplasmic low | AND | Nuclear low |
| Cytoplasmic low | AND | Nuclear high |
| Cytoplasmic high | AND | Nuclear low |
| Cytoplasmic high | AND | Nuclear high |
Clinical and pathological characteristics of patients included in microarray analysis
| Male | 10 (58.8%) | 7 (53.8%) | 0.785 | |
| | Female | 7 (41.2%) | 6 (46.2%) | — |
| | (Mean; median; s.d.) | 62.24; 65.00; 14.70 | 63.84; 64.00; 8.09 | 0.715 |
| Right-sided | 5 (29.4%) | 6 (46.2%) | 0.636 | |
| Left-sided | 6 (35.5%) | 3 (23.1%) | — | |
| | Rectum | 6 (35.5%) | 4 (30.8%) | — |
| Well | 3 (17.6%) | — | ||
| Moderate | 12 (70.6%) | 12 (92.3%) | 0.714 | |
| Poor | 2 (11.8%) | 1 (7.7%) | — | |
| | Unknown | — | — | — |
| N0 | 8 (47.1%) | 7 (53.8%) | 0.713 | |
| N1 | 9 (52.9%) | 6 (46.2%) | — | |
| | Unknown | — | — | — |
| Synchronous | 8 (47.1%) | 3 (23.1%) | 0.184 | |
| | Metachronous | 9 (52.9%) | 10 (76.9%) | — |
| Yes | 5 (29.4%) | 2 (15.4%) | 0.375 | |
| | No | 12 (70.6%) | 11 (84.6%) | — |
| Yes | 16 (94.1%) | 6 (53.8%) | ||
| | No | 1 (5.9%) | 7 (46.2%) | — |
| | (Mean; median; s.d.) | 2.41; 2.00; 1.77 | 1.54; 1.00; 0.88 | 0.131 |
| | (Mean; median; s.d.) | 5.18; 4.21; 3.37 | 4.25; 3.70; 2.52 | 0.408 |
| (Mean; median; s.d.) | 111.46; 54.28; 134.77 | 37.26; 33.30; 30.81 | 0.125 | |
Bold value denotes significant P-value (P<0.05).
Differentially expressed genes found by microarray analysis in early (<6 months) vs late (>24 months) recurrence groups
| SERPINB5 | Serpin B5 | 2.1 | |
| COLEC11 | Collectin-11 Precursor | 1.4 | 0.0018 |
| LAPTM4A | Lysosomal-associated transmembrane protein 4A | 1.3 | 0.0000 |
| C13orf3 | Spindle and kinetochore-associated protein RAMA1 | 1.3 | 0.0016 |
| LYPLAL1 | Lysophospholipase-like protein 1 | 1.3 | 0.0000 |
| GTF3C3 | General transcription factor 3C polypeptide 3 | 1.3 | 0.0204 |
| AMPD1 | AMP deaminase 1 | 1.3 | 0.0000 |
| ARL6IP5 | PRA1 family protein 3 | 1.3 | 0.0000 |
| SMYD2 | SET and MYND domain-containing protein 2 | 1.2 | 0.0118 |
| ASAP2 | Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 | 1.2 | 0.0356 |
| FYTTD1 | Forty-two-three domain-containing protein 1 | 1.2 | 0.0026 |
| THEM2 | Thioesterase superfamily member 2 | 0.8 | 0.0000 |
| BNIP3 | BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 | 0.7 | 0.0096 |
| GDF15 | Growth/differentiation factor 15 Precursor | 0.6 | 0.0000 |
Figure 2Microarray analysis of patients with short and prolonged time to recurrence identifies Maspin to be differentially expressed in stage IV CRC. (A) Median expression levels of Maspin in the early (<6 months, n=17) and prolonged (>24 months, n=13) time-to-recurrence groups (P=0.012). (B) Kaplan–Meier curves of 46 patients in Data set 1, illustrating time to recurrence in stage IV CRC liver metastasis patients with high Maspin expression (>median) and low Maspin expression (
Figure 3Mass-spectrometry based analysis of proteome differences between patients with early and prolonged time to recurrence in stage IV CRC. (A) Coomassie-stained protein gradient gel loaded with protein samples from tumours form patients with short (<6 months) and prolonged (>24 months) time to recurrence. This gel was used for mass-spectrometry analysis. (B) Venn diagram showing overlap between differently expressed genes and proteins found by micro-array and mass-spectrometry analysis. (C) Western blot analysis of Maspin levels in patients with early time to recurrence (<6 months) and the corresponding amount of spectral counts detected by mass-spectrometry analysis.
Differentially expressed proteins (P<0.05) found by mass-spectrometry analysis in early (<6 months) vs late recurrence (>24 months) groups
| SERPINB5 | Serpin peptidase inhibitor, clade B (ovalbumin), member 5 | ∞ | 0.01 |
| RNASET2 | Ribonuclease T2 | ∞ | 0.01 |
| ICAM1 | Intercellular adhesion molecule 1 | ∞ | 0.02 |
| EIF2B1 | Eukaryotic translation initiation factor 2B, subunit 1 alpha, 26 kDa | ∞ | 0.02 |
| TPSAB1 | Tryptase alpha/beta 1 | ∞ | 0.02 |
| SF3A3 | Splicing factor 3a, subunit 3, 60 kDa | ∞ | 0.05 |
| OLFM4 | Olfactomedin 4 | 31.9 | 0.05 |
| IGFALS | Insulin-like growth factor binding protein, acid labile subunit | 8.8 | 0.02 |
| PTK7 | PTK7 protein tyrosine kinase 7 | 8.3 | 0.02 |
| LANCL1 | LanC lantibiotic synthetase component C-like 1 (bacterial) | 7.8 | 0.01 |
| API5 | Apoptosis inhibitor 5 | 5.8 | 0.05 |
| XPOT | Exportin, tRNA (nuclear export receptor for tRNAs) | 5.8 | 0.05 |
| USP7 | Ubiquitin specific peptidase 7 (herpes virus-associated) | 5.3 | 0.04 |
| ACSL3 | Acyl-CoA synthetase long-chain family member 3 | 4.4 | 0.01 |
| NUP155 | Nucleoporin 155 kDa | 4 | 0.01 |
| CLIC4 | Chloride intracellular channel 4 | 3.9 | 0.01 |
| KRT6B | Keratin 6B | 3.6 | 0.04 |
| MYL9 | Myosin, light chain 9, regulatory | 3.3 | 0.03 |
| VARS | Valyl-tRNA synthetase | 3.2 | 0 |
| CYFIP1 | Cytoplasmic FMR1 interacting protein 1 | 3.1 | 0.03 |
| SYNE2 | Spectrin repeat containing, nuclear envelope 2 | 2.8 | 0.05 |
| NUDT21 | Nudix (nucleoside diphosphate linked moiety X)-type motif 21 | 2.6 | 0.05 |
| CKAP4 | Cytoskeleton-associated protein 4 | 2.3 | 0.02 |
| VIL1 | Villin 1 | 2.2 | 0.04 |
| HSD17B12 | Hydroxysteroid (17-beta) dehydrogenase 12 | 2 | 0.05 |
| YWHAQ | Tyrosine 3-monooxygenase | 2 | 0.04 |
| PTTG1IP | Pituitary tumour-transforming 1 interacting protein | ∞ | 0.011 |
| DUT | Deoxyuridine triphosphatase | ∞ | 0.013 |
| CASP1 | Caspase 1, apoptosis-related cysteine peptidase | ∞ | 0.018 |
| HSD17B4 | Hydroxysteroid (17-beta) dehydrogenase 4 | ∞ | 0.024 |
| VWF | von Willebrand factor | ∞ | 0.024 |
| RBM14 | RNA binding motif protein 14 | ∞ | 0.026 |
| LACTB2 | lactamase, beta 2 | ∞ | 0.028 |
| AMBP | Alpha-1-microglobulin/bikunin precursor | ∞ | 0.042 |
| ANKRD22 | Ankyrin repeat domain 22 | ∞ | 0.046 |
| ADCK3 | AarF domain containing kinase 3 | 13.8 | 0.001 |
| GYG1 | Glycogenin 1 | 9.0 | 0.003 |
| AKR1C3 | Aldo-keto reductase family 1, member C3 | 6.2 | 0.053 |
| PTGES2 | Prostaglandin E synthase 2 | 5.4 | 0.053 |
| SCCPDH | Saccharopine dehydrogenase (putative) | 2.8 | 0.007 |
| MRPL14 | Mitochondrial ribosomal protein L14 | 2.7 | 0.011 |
| CUL4A | Cullin 4A | 2.7 | 0.051 |
| SDCBP | Syndecan binding protein (syntenin) | 2.6 | 0.029 |
| CAST | Calpastatin | 2.1 | 0.019 |
| MCCC2 | Methylcrotonoyl-CoA carboxylase 2 (beta) | 1.9 | 0.004 |
| HMCN1 | Hemicentin 1 | 1.7 | 0.027 |
Figure 4Representative immunohistochemical Maspin staining in CRC specimens. (A) Cytoplasmic immunoreactivity with Maspin. Upper panel representing low scores: negative (i) intensity 1+ in >50% of cells (ii). Lower panel representing high scores: intensity 2+ (iii) and 3+ (iv) in >50% of cells. (B) Nuclear immunoreactivity of Maspin. Upper panel representing low scores: intensity 2+ in<50% of cells (i/ii). Lower panel representing high scores: intensity 3+ in>10% of cells (iii/iv).
Uni- and multivariate analysis of factors influencing disease-free survival in stage II CRC patients
| | ||||||
|---|---|---|---|---|---|---|
| Sex | 0.854 | 0.498–1.464 | 0.566 | 0.803 | 0.434–1.484 | 0.483 |
| Age (years) | 1.008 | 0.984–1.032 | 0.535 | 1.021 | 0.991–1.051 | 0.169 |
| Tumour size (mm) | 0.990 | 0.975–1.006 | 0.215 | 0.996 | 0.979–1.013 | 0.605 |
| Tumour location (rightsided/left sided/rectum) | 1.456 | 0.830–2.553 | 0.190 | 1.271 | 0.678–2.380 | 0.455 |
| Nodal stage (N0/N1/N2) | n.a. | | | n.a. | | |
| No. of lymph nodes retrieved | 0.960 | 0.907–1.015 | 0.152 | 0.970 | 0.911–1.033 | 0.343 |
| Histological grade (well/moderate/poor) | 1.925 | 1.056–3.511 | 1.820 | 0.923–3.591 | 0.084 | |
| Mucinous differentiation (present/absent) | 1.152 | 0.616–2.155 | 0.657 | 1.243 | 0.623–2.481 | 0.537 |
| Ulceration (present/absent) | 1.003 | 0.536–1.876 | 0.992 | 0.998 | 0.489–2.036 | 0.995 |
| Angioinvasion (present/absent) | 2.301 | 1.156–4.581 | 2.322 | 1.072–5.028 | ||
| Adjuvant chemotherapy (yes/no) | 1.289 | 0.943–1.762 | 0.112 | 1.259 | 0.869–1.768 | 0.184 |
| Microsatelite stability status (MSS/MSI) | 0.685 | 0.458–1.025 | 0.066 | 0.791 | 0.514–1.215 | 0.284 |
| Low nuclear, low cytoplasmic | 1.015 | 0.733–1.405 | 0.930 | 0.937 | 0.639–1.375 | 0.740 |
| Low nuclear, high cytoplasmic | 0.792 | 0.282–2.224 | 0.658 | 0.999 | 0.307–3.255 | 0.999 |
| High nuclear, high cytoplasmic | — | — | — | — | — | — |
| Low nuclear, low cytoplasmic | 0.987 | 0.694–1.404 | 0.943 | 0.717 | 0.440–1.168 | 0.201 |
| Low nuclear, high cytoplasmic | 1.291 | 0.359–4.643 | 0.696 | 2.074 | 0.396–10.859 | 0.388 |
| High nuclear, high cytoplasmic | ||||||
Bold value denotes significant P-value (P<0.05).
Figure 5In stage III CRC high Maspin expression in central cores is correlated with early time to recurrence and colorectal-specific death. (A) Kaplan–Meier curves illustrating the effects of different Maspin expression levels on time to recurrence in stage II CRC patients (P=0.98, log-rank test). (B) Kaplan–Meier curves illustrating the effect of different Maspin expression levels on colorectal-specific survival in stage II CRC patients (P=0.95, log-rank test). (C) Kaplan–Meier curves illustrating the effects of different Maspin expression levels on time to recurrence in stage III CRC patients (P=0.011, log-rank test). (D) Kaplan–Meier curves illustrating the effect of different Maspin expression levels on colorectal specific survival in stage III CRC patients (P=0.000, log-rank test). *The low cytoplasmic and high nuclear group were left out of the analysis due to the low number of tumours in this group (n=4 in stage II, n=2 in stage III).
Uni- and multivariate analysis of factors influencing disease-free survival in stage III CRC patients
| | ||||||
|---|---|---|---|---|---|---|
| Sex | 1.054 | 0.665–1.671 | 0.821 | 1.418 | 0.854–2.354 | 0.177 |
| Age (years) | 0.999 | 0.979–1.018 | 0.890 | 1.011 | 0.988–1.035 | 0.366 |
| Tumour size (mm) | 1.015 | 1.002–1.029 | 1.015 | 1.000–1.031 | ||
| Tumour location (rightsided/left sided/rectum) | 0.808 | 0.512–1.275 | 0.360 | 0.691 | 0.416–1.148 | 0.153 |
| Nodal stage (N0/N1/N2) | 2.110 | 1.328–3.353 | 2.262 | 1.355–3.777 | ||
| No. of lymph nodes retrieved | 0.989 | 0.942–1.038 | 0.651 | 0.992 | 0.940–1.047 | 0.765 |
| Histological grade | 0.673 | 0.412–1.099 | 0.113 | 0.643 | 0.367–1.127 | 0.123 |
| Mucinous differentiation (present/absent) | 1.093 | 0.628–1.902 | 0.752 | 1.131 | 0.612–2.092 | 0.694 |
| Ulceration (present/absent) | 0.807 | 0.463–1.404 | 0.447 | 0.560 | 0.320–1.007 | 0.053 |
| Angioinvasion (present/absent) | 3.226 | 2.029–5.130 | 3.107 | 1.860–5.189 | ||
| Adjuvant chemotherapy (yes/no) | 1.127 | 0.914–1.390 | 0.264 | 0.950 | 0.739–1.221 | 0.689 |
| Microsatelite stability status (MSS/MSI) | 1.025 | 0.713–1.472 | 0.895 | 0.365 | 0.523–1.269 | 0.365 |
| Low nuclear, low cytoplasmic | 1.088 | 0.814–1.454 | 0.568 | 1.175 | 0.841–1.641 | 0.344 |
| Low nuclear, high cytoplasmic | 2.150 | 1.159–3.987 | 2.541 | 1.297–4.977 | ||
| High nuclear, high cytoplasmic | — | — | — | — | — | — |
| Low nuclear, low cytoplasmic | 0.869 | 0.653–1.156 | 0.334 | 1.013 | 0.730–1.405 | 0.940 |
| Low nuclear, high cytoplasmic | 1.754 | 0.822–3.742 | 0.146 | 2.074 | 0.909–4.732 | 0.083 |
| High nuclear, high cytoplasmic | — | — | — | — | — | — |
Bold value denotes significant P-value (P<0.05).
Figure 6External validation, using the (A) Kaplan–Meier curves illustrating that high (>median) and low (