Literature DB >> 24000265

Composite Partial Likelihood Estimation Under Length-Biased Sampling, With Application to a Prevalent Cohort Study of Dementia.

Chiung-Yu Huang1, Jing Qin.   

Abstract

The Canadian Study of Health and Aging (CSHA) employed a prevalent cohort design to study survival after onset of dementia, where patients with dementia were sampled and the onset time of dementia was determined retrospectively. The prevalent cohort sampling scheme favors individuals who survive longer. Thus, the observed survival times are subject to length bias. In recent years, there has been a rising interest in developing estimation procedures for prevalent cohort survival data that not only account for length bias but also actually exploit the incidence distribution of the disease to improve efficiency. This article considers semiparametric estimation of the Cox model for the time from dementia onset to death under a stationarity assumption with respect to the disease incidence. Under the stationarity condition, the semiparametric maximum likelihood estimation is expected to be fully efficient yet difficult to perform for statistical practitioners, as the likelihood depends on the baseline hazard function in a complicated way. Moreover, the asymptotic properties of the semiparametric maximum likelihood estimator are not well-studied. Motivated by the composite likelihood method (Besag 1974), we develop a composite partial likelihood method that retains the simplicity of the popular partial likelihood estimator and can be easily performed using standard statistical software. When applied to the CSHA data, the proposed method estimates a significant difference in survival between the vascular dementia group and the possible Alzheimer's disease group, while the partial likelihood method for left-truncated and right-censored data yields a greater standard error and a 95% confidence interval covering 0, thus highlighting the practical value of employing a more efficient methodology. To check the assumption of stable disease for the CSHA data, we also present new graphical and numerical tests in the article. The R code used to obtain the maximum composite partial likelihood estimator for the CSHA data is available in the online Supplementary Material, posted on the journal web site.

Entities:  

Keywords:  Backward and forward recurrence time; Cross-sectional sampling; Random truncation; Renewal processes

Year:  2012        PMID: 24000265      PMCID: PMC3758493          DOI: 10.1080/01621459.2012.682544

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  10 in total

1.  A reevaluation of the duration of survival after the onset of dementia.

Authors:  C Wolfson; D B Wolfson; M Asgharian; C E M'Lan; T Ostbye; K Rockwood; D B Hogan
Journal:  N Engl J Med       Date:  2001-04-12       Impact factor: 91.245

2.  An overview of the Canadian Study of Health and Aging.

Authors:  I McDowell; G Hill; J Lindsay
Journal:  Int Psychogeriatr       Date:  2001       Impact factor: 3.878

3.  Pseudo-partial likelihood for proportional hazards models with biased-sampling data.

Authors:  Wei Yann Tsai
Journal:  Biometrika       Date:  2009-06-24       Impact factor: 2.445

4.  Checking stationarity of the incidence rate using prevalent cohort survival data.

Authors:  Masoud Asgharian; David B Wolfson; Xun Zhang
Journal:  Stat Med       Date:  2006-05-30       Impact factor: 2.373

5.  Global prevalence of dementia: a Delphi consensus study.

Authors:  Cleusa P Ferri; Martin Prince; Carol Brayne; Henry Brodaty; Laura Fratiglioni; Mary Ganguli; Kathleen Hall; Kazuo Hasegawa; Hugh Hendrie; Yueqin Huang; Anthony Jorm; Colin Mathers; Paulo R Menezes; Elizabeth Rimmer; Marcia Scazufca
Journal:  Lancet       Date:  2005-12-17       Impact factor: 79.321

6.  Length biased sampling in etiologic studies.

Authors:  R Simon
Journal:  Am J Epidemiol       Date:  1980-04       Impact factor: 4.897

7.  Biases in prevalent cohorts.

Authors:  R Brookmeyer; M H Gail
Journal:  Biometrics       Date:  1987-12       Impact factor: 2.571

8.  Statistical models for prevalent cohort data.

Authors:  M C Wang; R Brookmeyer; N P Jewell
Journal:  Biometrics       Date:  1993-03       Impact factor: 2.571

9.  Statistical methods for analyzing right-censored length-biased data under cox model.

Authors:  Jing Qin; Yu Shen
Journal:  Biometrics       Date:  2009-06-12       Impact factor: 2.571

Review 10.  Timing of initiation of antiretroviral therapy in AIDS-free HIV-1-infected patients: a collaborative analysis of 18 HIV cohort studies.

Authors:  Jonathan A C Sterne; Margaret May; Dominique Costagliola; Frank de Wolf; Andrew N Phillips; Ross Harris; Michele Jönsson Funk; Ronald B Geskus; John Gill; François Dabis; Jose M Miró; Amy C Justice; Bruno Ledergerber; Gerd Fätkenheuer; Robert S Hogg; Antonella D'Arminio Monforte; Michael Saag; Colette Smith; Schlomo Staszewski; Matthias Egger; Stephen R Cole
Journal:  Lancet       Date:  2009-04-08       Impact factor: 79.321

  10 in total
  7 in total

1.  Simple and fast overidentified rank estimation for right-censored length-biased data and backward recurrence time.

Authors:  Yifei Sun; Kwun Chuen Gary Chan; Jing Qin
Journal:  Biometrics       Date:  2017-05-15       Impact factor: 2.571

Review 2.  Nonparametric and semiparametric regression estimation for length-biased survival data.

Authors:  Yu Shen; Jing Ning; Jing Qin
Journal:  Lifetime Data Anal       Date:  2016-04-16       Impact factor: 1.588

3.  A risk set adjustment for proportional hazards modeling of combined cohort data.

Authors:  J H McVittie; V Addona
Journal:  J Appl Stat       Date:  2021-05-12       Impact factor: 1.416

4.  A Bayesian semiparametric method for analyzing length-biased data.

Authors:  Nusrat Harun; Bo Cai; Yu Shen
Journal:  J Appl Stat       Date:  2020-04-14       Impact factor: 1.416

5.  Estimation and Inference of Quantile Regression for Survival Data Under Biased Sampling.

Authors:  Gongjun Xu; Tony Sit; Lan Wang; Chiung-Yu Huang
Journal:  J Am Stat Assoc       Date:  2017-06-29       Impact factor: 5.033

6.  A pairwise likelihood augmented Cox estimator for left-truncated data.

Authors:  Fan Wu; Sehee Kim; Jing Qin; Rajiv Saran; Yi Li
Journal:  Biometrics       Date:  2017-08-29       Impact factor: 2.571

Review 7.  Model diagnostics for the proportional hazards model with length-biased data.

Authors:  Chi Hyun Lee; Jing Ning; Yu Shen
Journal:  Lifetime Data Anal       Date:  2018-02-16       Impact factor: 1.588

  7 in total

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