Literature DB >> 23997442

Host and virus protein interaction studies in understanding shrimp virus gene function.

Subhendu Kumar Otta1.   

Abstract

Protein-protein interaction studies have been widely used in several fields to characterize an unknown protein. This in turn helps to find out several pathways to understand a complex mechanism or discover a drug for treatment. Among the methods, yeast two-hybrid has widely been used in human, animal and plant research studies. This aspect of research has also been found useful in understanding the shrimp virus gene function. With respect to White spot syndrome virus, interaction studies have been applied to elucidate virus structure, understand the mode of entry of the virus, mechanism of virus replication and also to discover some of the host anti-viral proteins. Interaction studies on other shrimp viruses are scanty and only few reports available on Yellow head virus and Taura syndrome virus. All these findings are still in preliminary stage and lot more studies are necessary to have the clear picture. Protein interaction research on other shrimp viruses are still lacking. Considering all these, it appears that this field of research has a wide scope to understand the virulence mechanism of shrimp viruses where very little information is available till date.

Entities:  

Keywords:  Gene function; Penaeid shrimp; Protein–protein interaction; Viral disease; WSSV; Yeast two-hybrid

Year:  2012        PMID: 23997442      PMCID: PMC3550754          DOI: 10.1007/s13337-012-0085-0

Source DB:  PubMed          Journal:  Indian J Virol        ISSN: 0970-2822


  44 in total

1.  Insight into bacterial virulence mechanisms against host immune response via the Yersinia pestis-human protein-protein interaction network.

Authors:  Huiying Yang; Yuehua Ke; Jian Wang; Yafang Tan; Sebenzile K Myeni; Dong Li; Qinghai Shi; Yanfeng Yan; Hui Chen; Zhaobiao Guo; Yanzhi Yuan; Xiaoming Yang; Ruifu Yang; Zongmin Du
Journal:  Infect Immun       Date:  2011-09-12       Impact factor: 3.441

2.  Identification and characterization of syntenin binding protein in the black tiger shrimp Penaeus monodon.

Authors:  Moltira Tonganunt; Amornrat Phongdara; Wilaiwan Chotigeat; Kenichi Fujise
Journal:  J Biotechnol       Date:  2005-08-01       Impact factor: 3.307

3.  WSSV: VP26 binding protein and its biological activity.

Authors:  Weerayut Youtong; Panchalika Deachamag; Amornrat Phongdara; Wilaiwan Chotigeat
Journal:  Fish Shellfish Immunol       Date:  2010-09-29       Impact factor: 4.581

4.  Identification of a novel shrimp protein phosphatase and its association with latency-related ORF427 of white spot syndrome virus.

Authors:  Liqun Lu; Jimmy Kwang
Journal:  FEBS Lett       Date:  2004-11-05       Impact factor: 4.124

5.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

6.  Four major envelope proteins of white spot syndrome virus bind to form a complex.

Authors:  Qing Zhou; Limei Xu; Hui Li; Yi-Peng Qi; Feng Yang
Journal:  J Virol       Date:  2009-02-11       Impact factor: 5.103

7.  Characterization of a shrimp serine protease homolog, a binding protein of yellow head virus.

Authors:  Thanawat Sriphaijit; Timothy W Flegel; Saengchan Senapin
Journal:  Dev Comp Immunol       Date:  2007-04-09       Impact factor: 3.636

8.  Beta-integrin mediates WSSV infection.

Authors:  Deng-Feng Li; Ming-Chang Zhang; Hai-Jie Yang; Yan-Bing Zhu; Xun Xu
Journal:  Virology       Date:  2007-07-25       Impact factor: 3.616

9.  The role of F1 ATP synthase beta subunit in WSSV infection in the shrimp, Litopenaeus vannamei.

Authors:  Yan Liang; Jun-Jun Cheng; Bing Yang; Jie Huang
Journal:  Virol J       Date:  2010-06-30       Impact factor: 4.099

10.  Toward an understanding of the protein interaction network of the human liver.

Authors:  Jian Wang; Keke Huo; Lixin Ma; Liujun Tang; Dong Li; Xiaobi Huang; Yanzhi Yuan; Chunhua Li; Wei Wang; Wei Guan; Hui Chen; Chaozhi Jin; Juncheng Wei; Wanqiao Zhang; Yongsheng Yang; Qiongming Liu; Ying Zhou; Cuili Zhang; Zhihao Wu; Wangxiang Xu; Ying Zhang; Tao Liu; Donghui Yu; Yaping Zhang; Liang Chen; Dewu Zhu; Xing Zhong; Lixin Kang; Xiang Gan; Xiaolan Yu; Qi Ma; Jing Yan; Li Zhou; Zhongyang Liu; Yunping Zhu; Tao Zhou; Fuchu He; Xiaoming Yang
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

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  1 in total

1.  Screening and analysis on the protein interaction of the protein VP7 in grass carp reovirus.

Authors:  Xiuying Yan; Jiguo Xie; Jie Li; Cai Shuanghu; Zaohe Wu; Jichang Jian
Journal:  Virus Genes       Date:  2015-04-10       Impact factor: 2.332

  1 in total

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