Literature DB >> 23989155

Preliminary X-ray crystallographic studies of the TRAF domain of human TRAF4.

Jong Hwan Yoon1, Hyun Ho Park.   

Abstract

TNF receptor-associated factor (TRAF) proteins were initially identified as tumour necrosis factor receptor (TNFR)-interacting proteins that perform critical functions in the regulation of inflammation, antiviral responses and apoptosis. Although TRAF4 is a canonical TRAF protein, it contains a unique domain boundary and functions differently in the cell. In this study, the human TRAF4 TRAF domain, corresponding to amino acids 290-470, was overexpressed in Escherichia coli using engineered C-terminal His tags. The TRAF4 TRAF domain was then purified to homogeneity and crystallized at 293 K. Finally, X-ray diffraction data were collected to a resolution of 2.3 Å from a crystal belonging to space group P2(1)2(1)2(1), with unit-cell parameters a = 58.9, b = 87.9, c = 117.3 Å, α = β = γ = 90°.

Entities:  

Keywords:  TRAF domain; TRAF4

Mesh:

Substances:

Year:  2013        PMID: 23989155      PMCID: PMC3758155          DOI: 10.1107/S1744309113021192

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

Review 1.  Tumor necrosis factor receptor-associated factor (TRAF) family: adapter proteins that mediate cytokine signaling.

Authors:  J i Inoue; T Ishida; N Tsukamoto; N Kobayashi; A Naito; S Azuma; T Yamamoto
Journal:  Exp Cell Res       Date:  2000-01-10       Impact factor: 3.905

2.  A novel motif in the Crohn's disease susceptibility protein, NOD2, allows TRAF4 to down-regulate innate immune responses.

Authors:  Jill M Marinis; Craig R Homer; Christine McDonald; Derek W Abbott
Journal:  J Biol Chem       Date:  2010-11-19       Impact factor: 5.157

Review 3.  Structural analyses of death domains and their interactions.

Authors:  Hyun Ho Park
Journal:  Apoptosis       Date:  2011-03       Impact factor: 4.677

4.  Crystal structure of NALP3 protein pyrin domain (PYD) and its implications in inflammasome assembly.

Authors:  Ju Young Bae; Hyun Ho Park
Journal:  J Biol Chem       Date:  2011-08-31       Impact factor: 5.157

5.  Structural basis for self-association and receptor recognition of human TRAF2.

Authors:  Y C Park; V Burkitt; A R Villa; L Tong; H Wu
Journal:  Nature       Date:  1999-04-08       Impact factor: 49.962

6.  Expression of the tumor necrosis factor receptor-associated factors (TRAFs) 1 and 2 is a characteristic feature of Hodgkin and Reed-Sternberg cells.

Authors:  K F Izban; M Ergin; R L Martinez; S Alkan
Journal:  Mod Pathol       Date:  2000-12       Impact factor: 7.842

7.  Single amino acid substitutions confer the antiviral activity of the TRAF3 adaptor protein onto TRAF5.

Authors:  Peng Zhang; Anna Reichardt; Huanhuan Liang; Roghiyh Aliyari; David Cheng; Yaya Wang; Feng Xu; Genhong Cheng; Yingfang Liu
Journal:  Sci Signal       Date:  2012-11-13       Impact factor: 8.192

Review 8.  All TRAFs are not created equal: common and distinct molecular mechanisms of TRAF-mediated signal transduction.

Authors:  Jee Y Chung; Young Chul Park; Hong Ye; Hao Wu
Journal:  J Cell Sci       Date:  2002-02-15       Impact factor: 5.285

9.  REFMAC5 for the refinement of macromolecular crystal structures.

Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  Solving structures of protein complexes by molecular replacement with Phaser.

Authors:  Airlie J McCoy
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-12-13
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