Literature DB >> 23988486

Phylogenetic and forensic studies of the Southeast Florida Hispanic population using the next-generation forensic PowerPlex® Y23 STR marker system.

Silvia Calderon1, David Perez-Benedico, Lazaro Mesa, Daniel Guyton, Diane J Rowold, Rene J Herrera.   

Abstract

The purpose of this study is to examine the robustness and sensitivity of the newly available Y-STR multiplex kit, the PowerPlex® Y23 System, by comparing our data at the 23-loci level to the routinely used 17 loci provided by the AmpFlSTR® Yfiler® PCR Amplification kit. For the first time, allelic and genotypic frequencies for the 23 Y-STR loci included in the PowerPlex® Y23 System are provided for the Southeast Florida Hispanic (SFH) population. In addition, we have characterized the SFH population in terms of intra-population and inter-population parameters. We also compared these indices of forensic and population genetics interest in the SFH population to comparable data of previously published populations to assess their phylogenetic relationships. Our 23-loci data was shown to provide more discriminatory values as compared to the data when using only 17 loci. Also, the RST distance values demonstrate the superior capacity of the PowerPlex® Y23 system to discriminate among populations.
Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Keywords:  Forensic analysis; Phylogenetics; Population genetics; Southeast Florida Hispanics; Y-STRs; Y-chromosome

Mesh:

Year:  2013        PMID: 23988486     DOI: 10.1016/j.legalmed.2013.07.003

Source DB:  PubMed          Journal:  Leg Med (Tokyo)        ISSN: 1344-6223            Impact factor:   1.376


  4 in total

1.  Mayans: a Y chromosome perspective.

Authors:  David Perez-Benedico; Joel La Salvia; Zhaoshu Zeng; Giselle A Herrera; Ralph Garcia-Bertrand; Rene J Herrera
Journal:  Eur J Hum Genet       Date:  2016-03-09       Impact factor: 4.246

2.  At the southeast fringe of the Bantu expansion: genetic diversity and phylogenetic relationships to other sub-Saharan tribes.

Authors:  Diane Rowold; Ralph Garcia-Bertrand; Silvia Calderon; Luis Rivera; David Perez Benedico; Miguel A Alfonso Sanchez; Shilpa Chennakrishnaiah; Mangela Varela; Rene J Herrera
Journal:  Meta Gene       Date:  2014-10-02

3.  A global analysis of Y-chromosomal haplotype diversity for 23 STR loci.

Authors:  Josephine Purps; Sabine Siegert; Sascha Willuweit; Marion Nagy; Cíntia Alves; Renato Salazar; Sheila M T Angustia; Lorna H Santos; Katja Anslinger; Birgit Bayer; Qasim Ayub; Wei Wei; Yali Xue; Chris Tyler-Smith; Miriam Baeta Bafalluy; Begoña Martínez-Jarreta; Balazs Egyed; Beate Balitzki; Sibylle Tschumi; David Ballard; Denise Syndercombe Court; Xinia Barrantes; Gerhard Bäßler; Tina Wiest; Burkhard Berger; Harald Niederstätter; Walther Parson; Carey Davis; Bruce Budowle; Helen Burri; Urs Borer; Christoph Koller; Elizeu F Carvalho; Patricia M Domingues; Wafaa Takash Chamoun; Michael D Coble; Carolyn R Hill; Daniel Corach; Mariela Caputo; Maria E D'Amato; Sean Davison; Ronny Decorte; Maarten H D Larmuseau; Claudio Ottoni; Olga Rickards; Di Lu; Chengtao Jiang; Tadeusz Dobosz; Anna Jonkisz; William E Frank; Ivana Furac; Christian Gehrig; Vincent Castella; Branka Grskovic; Cordula Haas; Jana Wobst; Gavrilo Hadzic; Katja Drobnic; Katsuya Honda; Yiping Hou; Di Zhou; Yan Li; Shengping Hu; Shenglan Chen; Uta-Dorothee Immel; Rüdiger Lessig; Zlatko Jakovski; Tanja Ilievska; Anja E Klann; Cristina Cano García; Peter de Knijff; Thirsa Kraaijenbrink; Aikaterini Kondili; Penelope Miniati; Maria Vouropoulou; Lejla Kovacevic; Damir Marjanovic; Iris Lindner; Issam Mansour; Mouayyad Al-Azem; Ansar El Andari; Miguel Marino; Sandra Furfuro; Laura Locarno; Pablo Martín; Gracia M Luque; Antonio Alonso; Luís Souto Miranda; Helena Moreira; Natsuko Mizuno; Yasuki Iwashima; Rodrigo S Moura Neto; Tatiana L S Nogueira; Rosane Silva; Marina Nastainczyk-Wulf; Jeanett Edelmann; Michael Kohl; Shengjie Nie; Xianping Wang; Baowen Cheng; Carolina Núñez; Marian Martínez de Pancorbo; Jill K Olofsson; Niels Morling; Valerio Onofri; Adriano Tagliabracci; Horolma Pamjav; Antonia Volgyi; Gusztav Barany; Ryszard Pawlowski; Agnieszka Maciejewska; Susi Pelotti; Witold Pepinski; Monica Abreu-Glowacka; Christopher Phillips; Jorge Cárdenas; Danel Rey-Gonzalez; Antonio Salas; Francesca Brisighelli; Cristian Capelli; Ulises Toscanini; Andrea Piccinini; Marilidia Piglionica; Stefania L Baldassarra; Rafal Ploski; Magdalena Konarzewska; Emila Jastrzebska; Carlo Robino; Antti Sajantila; Jukka U Palo; Evelyn Guevara; Jazelyn Salvador; Maria Corazon De Ungria; Jae Joseph Russell Rodriguez; Ulrike Schmidt; Nicola Schlauderer; Pekka Saukko; Peter M Schneider; Miriam Sirker; Kyoung-Jin Shin; Yu Na Oh; Iulia Skitsa; Alexandra Ampati; Tobi-Gail Smith; Lina Solis de Calvit; Vlastimil Stenzl; Thomas Capal; Andreas Tillmar; Helena Nilsson; Stefania Turrina; Domenico De Leo; Andrea Verzeletti; Venusia Cortellini; Jon H Wetton; Gareth M Gwynne; Mark A Jobling; Martin R Whittle; Denilce R Sumita; Paulina Wolańska-Nowak; Rita Y Y Yong; Michael Krawczak; Michael Nothnagel; Lutz Roewer
Journal:  Forensic Sci Int Genet       Date:  2014-04-28       Impact factor: 4.882

4.  Polymorphism of 11 Y Chromosome Short Tandem Repeat Markers among Malaysian Aborigines.

Authors:  Sofia Sakina Mohd Yussup; Marlia Marzukhi; Badrul Munir Md-Zain; Kamaruddin Mamat; Farida Zuraina Mohd Yusof
Journal:  Evol Bioinform Online       Date:  2017-10-17       Impact factor: 1.625

  4 in total

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