Literature DB >> 23983263

Inhibition of SMG-8, a subunit of SMG-1 kinase, ameliorates nonsense-mediated mRNA decay-exacerbated mutant phenotypes without cytotoxicity.

Fusako Usuki1, Akio Yamashita, Tadafumi Shiraishi, Atsushi Shiga, Osamu Onodera, Itsuro Higuchi, Shigeo Ohno.   

Abstract

Nonsense-mediated mRNA decay (NMD) is an mRNA surveillance mechanism that eliminates aberrant mRNAs containing premature termination codons (PTCs). NMD inhibits the production of aberrant proteins that still retain, at least in part, wild-type function as well as dominant-negative peptides. Therefore, the selective inhibition of NMD has the potential to ameliorate NMD-exacerbated mutant phenotypes. However, we do not have sufficient knowledge of how to effectively suppress NMD with minimum cytotoxic effects. In this study, we aimed to identify NMD-related factors that can be targeted to efficiently inhibit NMD without causing significant cytotoxicity to restore the levels of truncated but partially functional proteins. We evaluated the knockdown of 15 NMD components in Ullrich congenital muscular dystrophy fibroblasts, which have a homozygous frameshift mutation causing a PTC in the collagen type VI α 2 gene. Of the 15 NMD factors tested, knockdown of SMG-8 produced the best effect for restoring defective mRNA and protein levels without affecting cell growth, cell-cycle progression, or endoplasmic reticulum stress. The efficacy of SMG-8 knockdown to improve the mutant phenotype was confirmed using another cell line, from a cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy patient who carries a PTC-containing mutation in HtrA serine peptidase 1. Our results suggest that SMG-8 is an appropriate target for inhibiting NMD to improve NMD-exacerbated mutant phenotypes. NMD inhibition by knockdown of SMG-8 may also be useful to induce synergy in combining the use of read-through drugs for patients with nonsense mutation-associated diseases.

Entities:  

Keywords:  genetic disorder with premature termination codon; siRNA; therapy

Mesh:

Substances:

Year:  2013        PMID: 23983263      PMCID: PMC3773753          DOI: 10.1073/pnas.1300654110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

1.  Collagen VI deficiency in Ullrich's disease.

Authors:  I Higuchi; M Suehara; H Iwaki; M Nakagawa; K Arimura; M Osame
Journal:  Ann Neurol       Date:  2001-04       Impact factor: 10.422

2.  Rent1, a trans-effector of nonsense-mediated mRNA decay, is essential for mammalian embryonic viability.

Authors:  S M Medghalchi; P A Frischmeyer; J T Mendell; A G Kelly; A M Lawler; H C Dietz
Journal:  Hum Mol Genet       Date:  2001-01-15       Impact factor: 6.150

3.  An unusual arrangement of two 14-3-3-like domains in the SMG5-SMG7 heterodimer is required for efficient nonsense-mediated mRNA decay.

Authors:  Stefanie Jonas; Oliver Weichenrieder; Elisa Izaurralde
Journal:  Genes Dev       Date:  2013-01-15       Impact factor: 11.361

Review 4.  Nonsense-mediated mRNA decay - mechanisms of substrate mRNA recognition and degradation in mammalian cells.

Authors:  Christoph Schweingruber; Simone C Rufener; David Zünd; Akio Yamashita; Oliver Mühlemann
Journal:  Biochim Biophys Acta       Date:  2013-02-20

5.  Frameshift mutation in the collagen VI gene causes Ullrich's disease.

Authors:  I Higuchi; T Shiraishi; T Hashiguchi; M Suehara; T Niiyama; M Nakagawa; K Arimura; I Maruyama; M Osame
Journal:  Ann Neurol       Date:  2001-08       Impact factor: 10.422

6.  Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay.

Authors:  A Yamashita; T Ohnishi; I Kashima; Y Taya; S Ohno
Journal:  Genes Dev       Date:  2001-09-01       Impact factor: 11.361

7.  Long mutant dystrophins and variable phenotypes: evasion of nonsense-mediated decay?

Authors:  T P Kerr; C A Sewry; S A Robb; R G Roberts
Journal:  Hum Genet       Date:  2001-10       Impact factor: 4.132

8.  Tissue-specific RNA surveillance? Nonsense-mediated mRNA decay causes collagen X haploinsufficiency in Schmid metaphyseal chondrodysplasia cartilage.

Authors:  John F Bateman; Susanna Freddi; Gary Nattrass; Ravi Savarirayan
Journal:  Hum Mol Genet       Date:  2003-02-01       Impact factor: 6.150

9.  Assembly of the dystrophin-associated protein complex does not require the dystrophin COOH-terminal domain.

Authors:  G E Crawford; J A Faulkner; R H Crosbie; K P Campbell; S C Froehner; J S Chamberlain
Journal:  J Cell Biol       Date:  2000-09-18       Impact factor: 10.539

10.  RNA surveillance is required for endoplasmic reticulum homeostasis.

Authors:  Kenjiro Sakaki; Sawako Yoshina; Xiaohua Shen; Jaeseok Han; Melinda R DeSantis; Mon Xiong; Shohei Mitani; Randal J Kaufman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-04       Impact factor: 11.205

View more
  19 in total

Review 1.  Nonsense suppression therapies in human genetic diseases.

Authors:  Patrícia Martins-Dias; Luísa Romão
Journal:  Cell Mol Life Sci       Date:  2021-03-22       Impact factor: 9.261

Review 2.  Nonsense-mediated RNA decay: an emerging modulator of malignancy.

Authors:  Kun Tan; Dwayne G Stupack; Miles F Wilkinson
Journal:  Nat Rev Cancer       Date:  2022-05-27       Impact factor: 69.800

Review 3.  Therapeutics based on stop codon readthrough.

Authors:  Kim M Keeling; Xiaojiao Xue; Gwen Gunn; David M Bedwell
Journal:  Annu Rev Genomics Hum Genet       Date:  2014-04-18       Impact factor: 8.929

4.  Fluorescence Amplification Method for Forward Genetic Discovery of Factors in Human mRNA Degradation.

Authors:  Andrei Alexandrov; Mei-Di Shu; Joan A Steitz
Journal:  Mol Cell       Date:  2016-12-22       Impact factor: 17.970

5.  A network of SMG-8, SMG-9 and SMG-1 C-terminal insertion domain regulates UPF1 substrate recruitment and phosphorylation.

Authors:  Aurélien Deniaud; Manikandan Karuppasamy; Thomas Bock; Simonas Masiulis; Karine Huard; Frédéric Garzoni; Kathrin Kerschgens; Matthias W Hentze; Andreas E Kulozik; Martin Beck; Gabriele Neu-Yilik; Christiane Schaffitzel
Journal:  Nucleic Acids Res       Date:  2015-06-30       Impact factor: 16.971

6.  Nonsense-mediated decay factors are involved in the regulation of selenoprotein mRNA levels during selenium deficiency.

Authors:  Ali Seyedali; Marla J Berry
Journal:  RNA       Date:  2014-06-19       Impact factor: 4.942

7.  A computational strategy to select optimized protein targets for drug development toward the control of cancer diseases.

Authors:  Nicolas Carels; Tatiana Tilli; Jack A Tuszynski
Journal:  PLoS One       Date:  2015-01-27       Impact factor: 3.240

Review 8.  Alternative RNA structure-coupled gene regulations in tumorigenesis.

Authors:  Feng-Chi Chen
Journal:  Int J Mol Sci       Date:  2014-12-29       Impact factor: 5.923

9.  Endoplasmic reticulum stress preconditioning modifies intracellular mercury content by upregulating membrane transporters.

Authors:  Fusako Usuki; Masatake Fujimura; Akio Yamashita
Journal:  Sci Rep       Date:  2017-09-28       Impact factor: 4.379

Review 10.  Therapeutic promise of engineered nonsense suppressor tRNAs.

Authors:  Joseph J Porter; Christina S Heil; John D Lueck
Journal:  Wiley Interdiscip Rev RNA       Date:  2021-02-10       Impact factor: 9.957

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.