Literature DB >> 23979830

Bayesian Modeling of Enteric Virus Density in Wastewater Using Left-Censored Data.

Tsuyoshi Kato1, Takayuki Miura, Satoshi Okabe, Daisuke Sano.   

Abstract

Stochastic models are used to express pathogen density in environmental samples for performing microbial risk assessment with quantitative uncertainty. However, enteric virus density in water often falls below the quantification limit (non-detect) of the analytical methods employed, and it is always difficult to apply stochastic models to a dataset with a substantially high number of non-detects, i.e., left-censored data. We applied a Bayesian model that is able to model both the detected data (detects) and non-detects to simulated left-censored datasets of enteric virus density in wastewater. One hundred paired datasets were generated for each of the 39 combinations of a sample size and the number of detects, in which three sample sizes (12, 24, and 48) and the number of detects from 1 to 12, 24 and 48 were employed. The simulated observation data were assigned to one of two groups, i.e., detects and non-detects, by setting values on the limit of quantification to obtain the assumed number of detects for creating censored datasets. Then, the Bayesian model was applied to the censored datasets, and the estimated mean and standard deviation were compared to the true values by root mean square deviation. The difference between the true distribution and posterior predictive distribution was evaluated by Kullback-Leibler (KL) divergence, and it was found that the estimation accuracy was strongly affected by the number of detects. It is difficult to describe universal criteria to decide which level of accuracy is enough, but eight or more detects are required to accurately estimate the posterior predictive distributions when the sample size is 12, 24, or 48. The posterior predictive distribution of virus removal efficiency with a wastewater treatment unit process was obtained as the log ratio posterior distributions between the posterior predictive distributions of enteric viruses in untreated wastewater and treated wastewater. The KL divergence between the true distribution and posterior predictive distribution of virus removal efficiency also depends on the number of detects, and eight or more detects in a dataset of treated wastewater are required for its accurate estimation.

Entities:  

Year:  2013        PMID: 23979830     DOI: 10.1007/s12560-013-9125-1

Source DB:  PubMed          Journal:  Food Environ Virol        ISSN: 1867-0334            Impact factor:   2.778


  21 in total

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Authors:  Unai Pérez-Sautu; Daisuke Sano; Susana Guix; Georg Kasimir; Rosa M Pintó; Albert Bosch
Journal:  Environ Microbiol       Date:  2011-11-28       Impact factor: 5.491

2.  Risk assessment of dietary exposure to pesticides using a Bayesian method.

Authors:  M João Paulo; Hilko van der Voet; Michiel J W Jansen; Cajo J F ter Braak; Jacob D van Klaveren
Journal:  Pest Manag Sci       Date:  2005-08       Impact factor: 4.845

3.  Fabricating data: how substituting values for nondetects can ruin results, and what can be done about it.

Authors:  Dennis R Helsel
Journal:  Chemosphere       Date:  2006-06-05       Impact factor: 7.086

4.  Quantitative analysis of human enteric adenoviruses in aquatic environments.

Authors:  E Haramoto; H Katayama; K Oguma; S Ohgaki
Journal:  J Appl Microbiol       Date:  2007-12       Impact factor: 3.772

5.  Improved methods for modelling drinking water treatment in quantitative microbial risk assessment; a case study of Campylobacter reduction by filtration and ozonation.

Authors:  P W M H Smeets; Y J Dullemont; P H A J M Van Gelder; J C Van Dijk; G J Medema
Journal:  J Water Health       Date:  2008-09       Impact factor: 1.744

6.  Particle and microorganism enumeration data: enabling quantitative rigor and judicious interpretation.

Authors:  Monica B Emelko; Philip J Schmidt; Park M Reilly
Journal:  Environ Sci Technol       Date:  2010-03-01       Impact factor: 9.028

7.  Incorporating method recovery uncertainties in stochastic estimates of raw water protozoan concentrations for QMRA.

Authors:  Susan R Petterson; Ryan S Signor; Nicholas J Ashbolt
Journal:  J Water Health       Date:  2007       Impact factor: 1.744

8.  Bayesian modelling of long-term dietary intakes from multiple sources.

Authors:  Marc C Kennedy
Journal:  Food Chem Toxicol       Date:  2009-10-09       Impact factor: 6.023

9.  Health risks of limited-contact water recreation.

Authors:  Samuel Dorevitch; Preethi Pratap; Meredith Wroblewski; Daniel O Hryhorczuk; Hong Li; Li C Liu; Peter A Scheff
Journal:  Environ Health Perspect       Date:  2011-10-26       Impact factor: 9.031

Review 10.  New tools for the study and direct surveillance of viral pathogens in water.

Authors:  Albert Bosch; Susana Guix; Daisuke Sano; Rosa M Pintó
Journal:  Curr Opin Biotechnol       Date:  2008-05-26       Impact factor: 9.740

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  3 in total

1.  Sapovirus in Wastewater Treatment Plants in Tunisia: Prevalence, Removal, and Genetic Characterization.

Authors:  Miguel F Varela; Imen Ouardani; Tsuyoshi Kato; Syunsuke Kadoya; Mahjoub Aouni; Daisuke Sano; Jesús L Romalde
Journal:  Appl Environ Microbiol       Date:  2018-03-01       Impact factor: 4.792

2.  Individual external doses below the lowest reference level of 1 mSv per year five years after the 2011 Fukushima nuclear accident among all children in Soma City, Fukushima: A retrospective observational study.

Authors:  Masaharu Tsubokura; Michio Murakami; Shuhei Nomura; Tomohiro Morita; Yoshitaka Nishikawa; Claire Leppold; Shigeaki Kato; Masahiro Kami
Journal:  PLoS One       Date:  2017-02-24       Impact factor: 3.240

Review 3.  Risk management of viral infectious diseases in wastewater reclamation and reuse: Review.

Authors:  Daisuke Sano; Mohan Amarasiri; Akihiko Hata; Toru Watanabe; Hiroyuki Katayama
Journal:  Environ Int       Date:  2016-03-14       Impact factor: 9.621

  3 in total

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