Literature DB >> 23976839

Multi-technique Characterization of Adsorbed Peptide and Protein Orientation: LK310 and Protein G B1.

J E Baio1, T Weidner, N T Samuel, Keith McCrea, Loren Baugh, Patrick S Stayton, David G Castner.   

Abstract

The ability to orient biologically active proteins on surfaces is a major challenge in the design, construction, and successful deployment of many medical technologies. As methods to orient biomolecules are developed, it is also essential to develop techniques that can an accurately determine the orientation and structure of these materials. In this study, two model protein and peptide systems are presented to highlight the strengths of three surface analysis techniques for characterizing protein films: time-of-flight secondary ion mass spectrometry (ToF-SIMS), sum-frequency generation (SFG) vibrational spectroscopy, and near-edge x-ray absorption fine structure (NEXAFS) spectroscopy. First, the orientation of Protein G B1, a rigid 6 kDa domain covalently attached to a maleimide-functionalized self-assembled monolayer, was examined using ToF-SIMS. Although the thickness of the Protein G layer was similar to the ToF-SIMS sampling depth, orientation of Protein G was successfully determined by analyzing the C2H5S+ intensity, a secondary ion derived from a methionine residue located at one end of the protein. Next, the secondary structure of a 13-mer leucine-lysine peptide (LK310) adsorbed onto hydrophilic quartz and hydrophobic fluorocarbon surfaces was examined. SFG spectra indicated that the peptide's lysine side chains were ordered on the quartz surface, while the peptide's leucine side chains were ordered on the fluorocarbon surface. NEXAFS results provided complementary information about the structure of the LK310 film and the orientations of amide bonds within the LK310 peptide.

Entities:  

Keywords:  LK310 peptides; NEXAFS; Protein G B1; SFG; ToF-SIMS; biointerfaces; hexafluoropropylene; maleimide-oligo(ethylene glycol); peptides; proteins

Year:  2010        PMID: 23976839      PMCID: PMC3749848          DOI: 10.1116/1.3456176

Source DB:  PubMed          Journal:  J Vac Sci Technol B Nanotechnol Microelectron        ISSN: 2166-2746


  45 in total

1.  Quantitative analysis of binary adsorbed protein films by time of flight secondary ion mass spectrometry.

Authors:  M S Wagner; M Shen; T A Horbett; David G Castner
Journal:  J Biomed Mater Res A       Date:  2003-01-01       Impact factor: 4.396

Review 2.  Molecular bonding and interactions at aqueous surfaces as probed by vibrational sum frequency spectroscopy.

Authors:  G L Richmond
Journal:  Chem Rev       Date:  2002-08       Impact factor: 60.622

3.  Bioactive protein nanoarrays on nickel oxide surfaces formed by dip-pen nanolithography.

Authors:  Jwa-Min Nam; Sang Woo Han; Ki-Bum Lee; Xiaogang Liu; Mark A Ratner; Chad A Mirkin
Journal:  Angew Chem Int Ed Engl       Date:  2004-02-27       Impact factor: 15.336

4.  Vibrational spectra of water molecules at quartz/water interfaces.

Authors: 
Journal:  Phys Rev Lett       Date:  1994-01-10       Impact factor: 9.161

5.  Nucleobase orientation and ordering in films of single-stranded DNA on gold.

Authors:  Dmitri Y Petrovykh; V Pérez-Dieste; Aric Opdahl; Hiromi Kimura-Suda; J M Sullivan; Michael J Tarlov; F J Himpsel; Lloyd J Whitman
Journal:  J Am Chem Soc       Date:  2006-01-11       Impact factor: 15.419

6.  Assembly and structure of alpha-helical peptide films on hydrophobic fluorocarbon surfaces.

Authors:  Tobias Weidner; Newton T Samuel; Keith McCrea; Lara J Gamble; Robert S Ward; David G Castner
Journal:  Biointerphases       Date:  2010-03       Impact factor: 2.456

7.  Preserving the structure of adsorbed protein films for time-of-flight secondary ion mass spectrometry analysis.

Authors:  Nan Xia; David G Castner
Journal:  J Biomed Mater Res A       Date:  2003-10-01       Impact factor: 4.396

8.  Determination of the orientation distribution of adsorbed fluorophores using TIRF. II. Measurements on porphyrin and cytochrome c.

Authors:  M A Bos; J M Kleijn
Journal:  Biophys J       Date:  1995-06       Impact factor: 4.033

9.  A solid-state deuterium NMR and sum-frequency generation study of the side-chain dynamics of peptides adsorbed onto surfaces.

Authors:  Nicholas F Breen; Tobias Weidner; Kun Li; David G Castner; Gary P Drobny
Journal:  J Am Chem Soc       Date:  2009-10-14       Impact factor: 15.419

10.  Interfacial structures of acidic and basic aqueous solutions.

Authors:  Chuanshan Tian; Na Ji; Glenn A Waychunas; Y Ron Shen
Journal:  J Am Chem Soc       Date:  2008-09-06       Impact factor: 15.419

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  17 in total

1.  Probing the orientation of electrostatically immobilized Protein G B1 by time-of-flight secondary ion spectrometry, sum frequency generation, and near-edge X-ray adsorption fine structure spectroscopy.

Authors:  Joe E Baio; Tobias Weidner; Loren Baugh; Lara J Gamble; Patrick S Stayton; David G Castner
Journal:  Langmuir       Date:  2011-12-22       Impact factor: 3.882

2.  Full membrane spanning self-assembled monolayers as model systems for UHV-based studies of cell-penetrating peptides.

Authors:  Johannes Franz; Daniel J Graham; Lars Schmüser; Joe E Baio; Marco Lelle; Kalina Peneva; Klaus Müllen; David G Castner; Mischa Bonn; Tobias Weidner
Journal:  Biointerphases       Date:  2015-03-19       Impact factor: 2.456

3.  Probing Albumin Adsorption onto Calcium Phosphates by XPS and ToF-SIMS.

Authors:  J E Baio; T Weidner; G Interlandi; C Mendoza-Barrera; H E Canavan; R Michel; D G Castner
Journal:  J Vac Sci Technol B Nanotechnol Microelectron       Date:  2011-07

4.  Characterizing protein G B1 orientation and its effect on immunoglobulin G antibody binding using XPS, ToF-SIMS, and quartz crystal microbalance with dissipation monitoring.

Authors:  Elisa T Harrison; Yung-Chen Wang; Lauren Carter; David G Castner
Journal:  Biointerphases       Date:  2020-03-13       Impact factor: 2.456

5.  Simulation and modeling of self-assembled monolayers of carboxylic acid thiols on flat and nanoparticle gold surfaces.

Authors:  Sirnegeda Techane; Donald R Baer; David G Castner
Journal:  Anal Chem       Date:  2011-07-26       Impact factor: 6.986

6.  High-throughput analysis of molecular orientation on surfaces by NEXAFS imaging of curved sample arrays.

Authors:  Joe E Baio; Cherno Jaye; Daniel A Fischer; Tobias Weidner
Journal:  ACS Comb Sci       Date:  2014-08-01       Impact factor: 3.784

7.  Probing orientation of immobilized humanized anti-lysozyme variable fragment by time-of-flight secondary-ion mass spectrometry.

Authors:  J E Baio; Fang Cheng; Daniel M Ratner; Patrick S Stayton; David G Castner
Journal:  J Biomed Mater Res A       Date:  2011-02-09       Impact factor: 4.396

8.  Diatom mimics: directing the formation of biosilica nanoparticles by controlled folding of lysine-leucine peptides.

Authors:  Joe E Baio; Ariel Zane; Vance Jaeger; Adrienne M Roehrich; Helmut Lutz; Jim Pfaendtner; Gary P Drobny; Tobias Weidner
Journal:  J Am Chem Soc       Date:  2014-10-17       Impact factor: 15.419

9.  SFG analysis of surface bound proteins: a route towards structure determination.

Authors:  Tobias Weidner; David G Castner
Journal:  Phys Chem Chem Phys       Date:  2013-08-14       Impact factor: 3.676

10.  Direct observation of phenylalanine orientations in statherin bound to hydroxyapatite surfaces.

Authors:  Tobias Weidner; Manish Dubey; Nicholas F Breen; Jason Ash; J E Baio; Cherno Jaye; Daniel A Fischer; Gary P Drobny; David G Castner
Journal:  J Am Chem Soc       Date:  2012-05-18       Impact factor: 15.419

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