Literature DB >> 2397208

A protein engineering study of the role of aspartate 158 in the catalytic mechanism of papain.

R Ménard1, H E Khouri, C Plouffe, R Dupras, D Ripoll, T Vernet, D C Tessier, F Lalberté, D Y Thomas, A C Storer.   

Abstract

The controversy concerning the various suggested roles for the side chain of Asp158 in the active site of papain has been clarified by using site-directed mutagenesis. Both wild-type papain and an Asp158 Asn variant were produced in a baculovirus-insect cell expression system, purified to homogeneity from the culture, and characterized kinetically. With CBZ-Phe-Arg-MCA as substrate, the kcat/KM and kcat values obtained for the Asp158Asn papain are 20,000 M-1.s-1 and 34 s-1, respectively, as compared with values of 120,000 M-1.s-1 and 51 s-1 obtained for the wild-type papain. In addition, the pH-(kcat/KM) profile for the Asp158Asn enzyme is shifted relative to that for the wild-type enzyme to lower values by approximately 0.3 pH unit. This shows clearly that Asp158 is not, as previously postulated, an essential catalytic residue. In addition, the pH dependency data are interpreted to indicate that, contrary to earlier suggestions, the negatively charged side chain of Asp158 does not significantly stabilize the active-site thiolate-imidazolium ion pair. However, its presence does influence the pKa's associated with ion-pair formation in a manner compatible with electrostatic considerations.

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Year:  1990        PMID: 2397208     DOI: 10.1021/bi00480a021

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  30 in total

1.  Electrostatic interactions in the association of proteins: an analysis of the thrombin-hirudin complex.

Authors:  A Karshikov; W Bode; A Tulinsky; S R Stone
Journal:  Protein Sci       Date:  1992-06       Impact factor: 6.725

2.  Evaluation of hydrogen-bonding and enantiomeric P2-S2 hydrophobic contacts in dynamic aspects of molecular recognition by papain.

Authors:  M Patel; I S Kayani; W Templeton; G W Mellor; E W Thomas; K Brocklehurst
Journal:  Biochem J       Date:  1992-11-01       Impact factor: 3.857

3.  Cyclic, linear, cycloretro-isomer, and cycloretro-inverso peptides derived from the C-terminal sequence of bradykinin as substrates or inhibitors of serine and cysteine proteases.

Authors:  Aurelio Resende Lima; Luiz Juliano; Maria Aparecida Juliano
Journal:  Protein J       Date:  2004-05       Impact factor: 2.371

4.  A model to explain the pH-dependent specificity of cathepsin B-catalysed hydrolyses.

Authors:  H E Khouri; C Plouffe; S Hasnain; T Hirama; A C Storer; R Ménard
Journal:  Biochem J       Date:  1991-05-01       Impact factor: 3.857

5.  Metastability of papain and the molecular mechanism for its sequential acid-denaturation.

Authors:  Rosa Eréndira Fosado-Quiroz; Arturo Rojo-Domínguez
Journal:  Protein J       Date:  2011-03       Impact factor: 2.371

6.  Hydrolysis conditions for antioxidant peptides derived from enzymatic hydrolysates of sandfish (Arctoscopus japonicus).

Authors:  Hye Lim Jang; Seung Ryeul Shin; Kyung Young Yoon
Journal:  Food Sci Biotechnol       Date:  2017-09-08       Impact factor: 2.391

7.  Three-dimensional structures of enzyme-substrate complexes of the hydroxynitrile lyase from Hevea brasiliensis.

Authors:  J Zuegg; K Gruber; M Gugganig; U G Wagner; C Kratky
Journal:  Protein Sci       Date:  1999-10       Impact factor: 6.725

8.  Substrate specificity of barley cysteine endoproteases EP-A and EP-B.

Authors:  A Davy; I Svendsen; S O Sørensen; M Blom Sørensen; J Rouster; M Meldal; D J Simpson; V Cameron-Mills
Journal:  Plant Physiol       Date:  1998-05       Impact factor: 8.340

9.  Variation in the pH-dependent pre-steady-state and steady-state kinetic characteristics of cysteine-proteinase mechanism: evidence for electrostatic modulation of catalytic-site function by the neighbouring carboxylate anion.

Authors:  Syeed Hussain; Surapong Pinitglang; Tamara S F Bailey; James D Reid; Michael A Noble; Marina Resmini; Emrys W Thomas; Richard B Greaves; Chandra S Verma; Keith Brocklehurst
Journal:  Biochem J       Date:  2003-06-15       Impact factor: 3.857

10.  Carnitine medium/long chain acyltransferase of microsomes seems to be the previously cloned approximately 54 kDa protein of unknown function.

Authors:  M S Murthy; S V Pande
Journal:  Mol Cell Biochem       Date:  1993-05-26       Impact factor: 3.396

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