Literature DB >> 23969247

Lipidomics as a principal tool for advancing biomedical research.

Sin Man Lam1, Guanghou Shui.   

Abstract

Lipidomics, which targets at the construction of a comprehensive map of lipidome comprising the entire lipid pool within a cell or tissue, is currently emerging as an independent discipline at the interface of lipid biology, technology and medicine. The diversity and complexity of the biological lipidomes call for technical innovation and improvement to meet the needs of various biomedical studies. The recent wave of expansion in the field of lipidomic research is mainly attributed to advances in analytical technologies, in particular, the development of new mass spectrometric and chromatographic tools for the characterization and quantification of the wide array of diverse lipid species in the cellular lipidome. Here, we review some of the key technical advances in lipidome analysis and put forth the applications of lipidomics in addressing the biological roles of lipids in numerous disease models including the metabolic syndrome, neurodegenerative diseases and infectious diseases, as well as the increasing urgency to construct the lipidome inventory for various mammalian/organism models useful for biomedical research.
Copyright © [2103], The Society of Chinese Scholars on Exercise Physiology and Fitness. Published by Elsevier (Singapore) Pvt Ltd. All rights reserved.

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Keywords:  APCI; CE; CL; COW; CS; Cer; Chol; DAG; DGDG; ESI; FA; GM3; GalCer; GluCer; HREIC; Infectious diseases; LC/MS or GC/MS; LPC; LPE; LPI; LPS; Lipidomics; MALDI; MGDG; MRM; Mass spectrometry; Metabolic syndrome; NL; Neurodegenerative diseases; PA; PAH; PAP; PC; PE; PG; PI; PIS; PS; PreIS; S1P; SL; SM; SQDG; Sph; TAG; atmosphere chemical ionization; cardiolipin; ceramides; cholesterol; cholesterol ester; cholesterol sulfate; correlation optimized warping; diacylglycerol; digalactosyldiacylglycerols; electrospray ionization; fatty acid; galactosylceramide; ganglioside mannoside 3; glucosyleceramide; high resolution extracted ion chromatogram; liquid chromatography- or gas chromatography-mass spectrometry; lysophosphatidylcholine; lysophosphatidylethanolamine; lysophosphatidylinositol; lysophosphatidylserine; matrixassisted laser desorption/ionization; monogalactosyldiacylglycerols; multiple reaction monitoring; neutral loss; phosphatidate phosphatases; phosphatidate phosphohydrolases; phosphatidic acid; phosphatidylcholine; phosphatidylethanolamine; phosphatidylglycerol; phosphatidylinositol; phosphatidylserine; precursor ion scan; product ion scan; sphingomyelins; sphingosine; sphingosine-1-phosphate; sulfatides; sulfoquinovosyldiacylglycerols; triacylglycerol

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Year:  2013        PMID: 23969247     DOI: 10.1016/j.jgg.2013.06.007

Source DB:  PubMed          Journal:  J Genet Genomics        ISSN: 1673-8527            Impact factor:   4.275


  26 in total

Review 1.  Oxidative lipidomics coming of age: advances in analysis of oxidized phospholipids in physiology and pathology.

Authors:  Corinne M Spickett; Andrew R Pitt
Journal:  Antioxid Redox Signal       Date:  2015-03-26       Impact factor: 8.401

2.  A relative quantitative positive/negative ion switching method for untargeted lipidomics via high resolution LC-MS/MS from any biological source.

Authors:  Susanne B Breitkopf; Stéphane J H Ricoult; Min Yuan; Ying Xu; David A Peake; Brendan D Manning; John M Asara
Journal:  Metabolomics       Date:  2017-02-07       Impact factor: 4.290

3.  Top-down lipidomics of low density lipoprotein reveal altered lipid profiles in advanced chronic kidney disease.

Authors:  Ana Reis; Alisa Rudnitskaya; Pajaree Chariyavilaskul; Neeraj Dhaun; Vanessa Melville; Jane Goddard; David J Webb; Andrew R Pitt; Corinne M Spickett
Journal:  J Lipid Res       Date:  2014-11-25       Impact factor: 5.922

4.  Follicular fluid lipid fingerprinting from women with PCOS and hyper response during IVF treatment.

Authors:  Fernanda Bertuccez Cordeiro; Thaís Regiani Cataldi; Lívia do Vale Teixeira da Costa; Camila Bruna de Lima; Juliana Stevanato; Daniel Suslik Zylbersztejn; Christina Ramires Ferreira; Marcos Nogueira Eberlin; Agnaldo Pereira Cedenho; Edson Guimarães Lo Turco
Journal:  J Assist Reprod Genet       Date:  2014-11-06       Impact factor: 3.412

5.  Lipidomic analysis of human tear fluid reveals structure-specific lipid alterations in dry eye syndrome.

Authors:  Sin Man Lam; Louis Tong; Bastien Reux; Xinrui Duan; Andrea Petznick; Siew Sian Yong; Cynthia Boo Shiao Khee; Martin J Lear; Markus R Wenk; Guanghou Shui
Journal:  J Lipid Res       Date:  2013-11-28       Impact factor: 5.922

6.  Lipid dynamics in zebrafish embryonic development observed by DESI-MS imaging and nanoelectrospray-MS.

Authors:  V Pirro; S C Guffey; M S Sepúlveda; C T Mahapatra; C R Ferreira; A K Jarmusch; R G Cooks
Journal:  Mol Biosyst       Date:  2016-06

7.  Multiplexed peptide analysis for kinetic measurements of major human apolipoproteins by LC/MS/MS.

Authors:  Mikaël Croyal; Fanta Fall; Véronique Ferchaud-Roucher; Maud Chétiveaux; Yassine Zaïr; Khadija Ouguerram; Michel Krempf; Estelle Nobécourt
Journal:  J Lipid Res       Date:  2016-01-15       Impact factor: 5.922

Review 8.  Novel advances in shotgun lipidomics for biology and medicine.

Authors:  Miao Wang; Chunyan Wang; Rowland H Han; Xianlin Han
Journal:  Prog Lipid Res       Date:  2015-12-15       Impact factor: 16.195

9.  The LUX Score: A Metric for Lipidome Homology.

Authors:  Chakravarthy Marella; Andrew E Torda; Dominik Schwudke
Journal:  PLoS Comput Biol       Date:  2015-09-22       Impact factor: 4.475

Review 10.  Lipidomic analysis of epidermal lipids: a tool to predict progression of inflammatory skin disease in humans.

Authors:  Shan Li; Gitali Ganguli-Indra; Arup K Indra
Journal:  Expert Rev Proteomics       Date:  2016-05       Impact factor: 3.940

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