Literature DB >> 23962986

Multimodal deformable registration of traumatic brain injury MR volumes via the Bhattacharyya distance.

Yifei Lou1, Andrei Irimia, Patricio A Vela, Micah C Chambers, John D Van Horn, Paul M Vespa, Allen R Tannenbaum.   

Abstract

An important problem of neuroimaging data analysis for traumatic brain injury (TBI) is the task of coregistering MR volumes acquired using distinct sequences in the presence of widely variable pixel movements which are due to the presence and evolution of pathology. We are motivated by this problem to design a numerically stable registration algorithm which handles large deformations. To this end, we propose a new measure of probability distributions based on the Bhattacharyya distance, which is more stable than the widely used mutual information due to better behavior of the square root function than the logarithm at zero. Robustness is illustrated on two TBI patient datasets, each containing 12 MR modalities. We implement our method on graphics processing units (GPU) so as to meet the clinical requirement of time-efficient processing of TBI data. We find that 6 sare required to register a pair of volumes with matrix sizes of 256 × 256 × 60 on the GPU. In addition to exceptional time efficiency via its GPU implementation, this methodology provides a clinically informative method for the mapping and evaluation of anatomical changes in TBI.

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Year:  2013        PMID: 23962986      PMCID: PMC4000558          DOI: 10.1109/TBME.2013.2259625

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  32 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Automated cerebrum segmentation from three-dimensional sagittal brain MR images.

Authors:  Shin Huh; Terence A Ketter; Kwang Hoon Sohn; Chulhee Lee
Journal:  Comput Biol Med       Date:  2002-09       Impact factor: 4.589

3.  Geodesic regression for image time-series.

Authors:  Marc Niethammer; Yang Huang; François-Xavier Vialard
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

4.  SEGMENTATION OF SERIAL MRI OF TBI PATIENTS USING PERSONALIZED ATLAS CONSTRUCTION AND TOPOLOGICAL CHANGE ESTIMATION.

Authors:  Bo Wang; Marcel Prastawa; Suyash P Awate; Andrei Irimia; Micah C Chambers; Paul M Vespa; John D van Horn; Guido Gerig
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2012

5.  Skull-stripping magnetic resonance brain images using a model-based level set.

Authors:  Audrey H Zhuang; Daniel J Valentino; Arthur W Toga
Journal:  Neuroimage       Date:  2006-05-11       Impact factor: 6.556

6.  Deformable templates using large deformation kinematics.

Authors:  G E Christensen; R D Rabbitt; M I Miller
Journal:  IEEE Trans Image Process       Date:  1996       Impact factor: 10.856

7.  A protocol for evaluation of similarity measures for non-rigid registration.

Authors:  Darko Skerl; Bostjan Likar; Franjo Pernus
Journal:  Med Image Anal       Date:  2007-06-22       Impact factor: 8.545

8.  Evolutions equations in computational anatomy.

Authors:  Laurent Younes; Felipe Arrate; Michael I Miller
Journal:  Neuroimage       Date:  2008-11-12       Impact factor: 6.556

9.  Multi-modal volume registration by maximization of mutual information.

Authors:  W M Wells; P Viola; H Atsumi; S Nakajima; R Kikinis
Journal:  Med Image Anal       Date:  1996-03       Impact factor: 8.545

10.  Geometric metamorphosis.

Authors:  Marc Niethammer; Gabriel L Hart; Danielle F Pace; Paul M Vespa; Andrei Irimia; John D Van Horn; Stephen R Aylward
Journal:  Med Image Comput Comput Assist Interv       Date:  2011
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  1 in total

1.  Modeling 4D Pathological Changes by Leveraging Normative Models.

Authors:  Bo Wang; Marcel Prastawa; Andrei Irimia; Avishek Saha; Wei Liu; S Y Matthew Goh; Paul M Vespa; John D Van Horn; Guido Gerig
Journal:  Comput Vis Image Underst       Date:  2016-10       Impact factor: 3.876

  1 in total

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