Literature DB >> 23961202

RNA interference: A futuristic tool and its therapeutic applications.

Anghesom Ambesajir1, Atul Kaushik, Jeevan J Kaushik, Sham T Petros.   

Abstract

RNA interference is a post transcriptional gene silencing mechanism that is triggered by double-stranded RNA (dsRNA). Various attributes of the 3' end structure, including overhang length and sequence composition, plays a primary role in determining the position of the Dicer cleavage in both dsRNA and unimolecular, short hairpin RNA (shRNA). The specificity and robustness of RNAi have triggered an immense interest in using RNAi as a tool in various settings. RNAi is a mechanism for controlling normal gene expression which has recently began to be employed as a potential therapeutic agent for a wide range of disorders, including cancer, infectious diseases and metabolic disorders. Clinical trials with RNAi have now begin, but major obstacles, such as off-target effects, toxicity and unsafe delivery methods, have to be overcome before RNAi can be considered as a conventional drug. It is also used as a tool to improve crops by providing resistance against parasites and modified versions of siRNA that are directed against disease causing genes are being developed, some of which are already tested in clinical trials. In this paper, we first reviewed the RNAi mechanism and then focussed on some of its applications in biomedical research such as treatment for HIV, viral hepatitis and several other diseases.

Entities:  

Keywords:  Antiviral; Dicer; Gene silencing; MiRNAs, microRNAs; RISC, RNA induced silencing complex; RNAi; SiRNAs, small interfering RNAs

Year:  2012        PMID: 23961202      PMCID: PMC3730950          DOI: 10.1016/j.sjbs.2012.08.001

Source DB:  PubMed          Journal:  Saudi J Biol Sci        ISSN: 1319-562X            Impact factor:   4.219


  34 in total

1.  An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells.

Authors:  S M Hammond; E Bernstein; D Beach; G J Hannon
Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

2.  U6 promoter-driven siRNAs with four uridine 3' overhangs efficiently suppress targeted gene expression in mammalian cells.

Authors:  Makoto Miyagishi; Kazunari Taira
Journal:  Nat Biotechnol       Date:  2002-05       Impact factor: 54.908

3.  A DNA vector-based RNAi technology to suppress gene expression in mammalian cells.

Authors:  Guangchao Sui; Christina Soohoo; El Bachir Affar; Frédérique Gay; Yujiang Shi; William C Forrester; Yang Shi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

4.  Absence of non-specific effects of RNA interference triggered by long double-stranded RNA in mouse oocytes.

Authors:  Paula Stein; Fanyi Zeng; Hua Pan; Richard M Schultz
Journal:  Dev Biol       Date:  2005-09-09       Impact factor: 3.582

5.  Synthesis of 2'-O-modified adenosine building blocks and application for RNA interference.

Authors:  Dalibor Odadzic; Jesper B Bramsen; Romualdas Smicius; Claus Bus; Jørgen Kjems; Joachim W Engels
Journal:  Bioorg Med Chem       Date:  2007-09-15       Impact factor: 3.641

Review 6.  RNAi therapeutics: an update on delivery.

Authors:  Thu Nguyen; Ellen M Menocal; Jens Harborth; Johannes H Fruehauf
Journal:  Curr Opin Mol Ther       Date:  2008-04

7.  RNA interference blocks gene expression and RNA synthesis from hepatitis C replicons propagated in human liver cells.

Authors:  Joyce A Wilson; Sumedha Jayasena; Anastasia Khvorova; Sarah Sabatinos; Ian Gaël Rodrigue-Gervais; Sudha Arya; Farida Sarangi; Marees Harris-Brandts; Sylvie Beaulieu; Christopher D Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-19       Impact factor: 11.205

8.  Human immunodeficiency virus type 1 escape from RNA interference.

Authors:  Daniel Boden; Oliver Pusch; Frederick Lee; Lynne Tucker; Bharat Ramratnam
Journal:  J Virol       Date:  2003-11       Impact factor: 5.103

9.  siVirus: web-based antiviral siRNA design software for highly divergent viral sequences.

Authors:  Yuki Naito; Kumiko Ui-Tei; Toru Nishikawa; Yutaka Takebe; Kaoru Saigo
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

10.  Ethical perspectives on RNA interference therapeutics.

Authors:  Mette Ebbesen; Thomas G Jensen; Svend Andersen; Finn Skou Pedersen
Journal:  Int J Med Sci       Date:  2008-06-25       Impact factor: 3.738

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  10 in total

Review 1.  Precise and efficient siRNA design: a key point in competent gene silencing.

Authors:  E Fakhr; F Zare; L Teimoori-Toolabi
Journal:  Cancer Gene Ther       Date:  2016-03-18       Impact factor: 5.987

2.  Interaction of Cationic Carbosilane Dendrimers and Their siRNA Complexes with MCF-7 Cells Cultured in 3D Spheroids.

Authors:  Kamila Białkowska; Piotr Komorowski; Rafael Gomez-Ramirez; Francisco Javier de la Mata; Maria Bryszewska; Katarzyna Miłowska
Journal:  Cells       Date:  2022-05-19       Impact factor: 7.666

3.  Cationic lipid guided short-hairpin RNA interference of annexin A2 attenuates tumor growth and metastasis in a mouse lung cancer stem cell model.

Authors:  Terrick Andey; Srujan Marepally; Apurva Patel; Tanise Jackson; Shubhashish Sarkar; Malaney O'Connell; Rakesh C Reddy; Srikumar Chellappan; Pomila Singh; Mandip Singh
Journal:  J Control Release       Date:  2014-04-12       Impact factor: 9.776

4.  Interaction of Cationic Carbosilane Dendrimers and Their siRNA Complexes with MCF-7 Cells.

Authors:  Kamila Białkowska; Katarzyna Miłowska; Sylwia Michlewska; Paulina Sokołowska; Piotr Komorowski; Tania Lozano-Cruz; Rafael Gomez-Ramirez; Francisco Javier de la Mata; Maria Bryszewska
Journal:  Int J Mol Sci       Date:  2021-07-01       Impact factor: 5.923

5.  Glucose-Related Protein 78 Expression and Its Effects on Cisplatin-Resistance in Cervical Cancer.

Authors:  Chengyan Luo; Wen Fan; Yi Jiang; Shulin Zhou; Wenjun Cheng
Journal:  Med Sci Monit       Date:  2018-04-13

Review 6.  Platelet-derived growth factor receptor/platelet-derived growth factor (PDGFR/PDGF) system is a prognostic and treatment response biomarker with multifarious therapeutic targets in cancers.

Authors:  Kwaku Appiah-Kubi; Ying Wang; Hai Qian; Min Wu; Xiaoyuan Yao; Yan Wu; Yongchang Chen
Journal:  Tumour Biol       Date:  2016-05-19

7.  Structural Dynamics of Human Argonaute2 and Its Interaction with siRNAs Designed to Target Mutant tdp43.

Authors:  Vishwambhar Bhandare; Amutha Ramaswamy
Journal:  Adv Bioinformatics       Date:  2016-03-06

8.  Metabolic engineering of cottonseed oil biosynthesis pathway via RNA interference.

Authors:  Zhongping Xu; Jingwen Li; Xiaoping Guo; Shuangxia Jin; Xianlong Zhang
Journal:  Sci Rep       Date:  2016-09-13       Impact factor: 4.379

9.  Inhibition of prostate cancer cell growth in vivo with short hairpin RNA targeting SATB1.

Authors:  Qiang Wang; Shi-Cheng Hu; Chun-Sheng Yang; Jia-Cun Chen; Jun-Nian Zheng; Xiao-Qing Sun; Jun-Qi Wang
Journal:  Oncol Lett       Date:  2017-09-20       Impact factor: 2.967

10.  A Unique Gene-Silencing Approach, Using an Intelligent RNA Expression Device (iRed), Results in Minimal Immune Stimulation When Given by Local Intrapleural Injection in Malignant Pleural Mesothelioma.

Authors:  Hidenori Ando; Noriko Saito-Tarashima; Amr S Abu Lila; Nozomi Kinjo; Taro Shimizu; Yu Ishima; Noriaki Minakawa; Tatsuhiro Ishida
Journal:  Molecules       Date:  2020-04-09       Impact factor: 4.411

  10 in total

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