Literature DB >> 23957311

Revised basin-hopping Monte Carlo algorithm for structure optimization of clusters and nanoparticles.

Gustavo G Rondina1, Juarez L F Da Silva.   

Abstract

Suggestions for improving the Basin-Hopping Monte Carlo (BHMC) algorithm for unbiased global optimization of clusters and nanoparticles are presented. The traditional basin-hopping exploration scheme with Monte Carlo sampling is improved by bringing together novel strategies and techniques employed in different global optimization methods, however, with the care of keeping the underlying algorithm of BHMC unchanged. The improvements include a total of eleven local and nonlocal trial operators tailored for clusters and nanoparticles that allow an efficient exploration of the potential energy surface, two different strategies (static and dynamic) of operator selection, and a filter operator to handle unphysical solutions. In order to assess the efficiency of our strategies, we applied our implementation to several classes of systems, including Lennard-Jones and Sutton-Chen clusters with up to 147 and 148 atoms, respectively, a set of Lennard-Jones nanoparticles with sizes ranging from 200 to 1500 atoms, binary Lennard-Jones clusters with up to 100 atoms, (AgPd)55 alloy clusters described by the Sutton-Chen potential, and aluminum clusters with up to 30 atoms described within the density functional theory framework. Using unbiased global search our implementation was able to reproduce successfully the great majority of all published results for the systems considered and in many cases with more efficiency than the standard BHMC. We were also able to locate previously unknown global minimum structures for some of the systems considered. This revised BHMC method is a valuable tool for aiding theoretical investigations leading to a better understanding of atomic structures of clusters and nanoparticles.

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Year:  2013        PMID: 23957311     DOI: 10.1021/ci400224z

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  5 in total

1.  A genetic algorithm survey on closed-shell atomic nitrogen clusters employing a quantum chemical approach.

Authors:  M X Silva; F T Silva; B R L Galvão; J P Braga; J C Belchior
Journal:  J Mol Model       Date:  2018-07-07       Impact factor: 1.810

2.  Aluminum cluster for CO and O2 adsorption.

Authors:  Bipasa Samanta; Turbasu Sengupta; Sourav Pal
Journal:  J Mol Model       Date:  2018-12-06       Impact factor: 1.810

3.  Origin of high oxygen reduction reaction activity of Pt12 and strategy to obtain better catalyst using sub-nanosized Pt-alloy clusters.

Authors:  Kasumi Miyazaki; Hirotoshi Mori
Journal:  Sci Rep       Date:  2017-03-28       Impact factor: 4.379

4.  How to determine accurate chemical ordering in several nanometer large bimetallic crystallites from electronic structure calculations.

Authors:  Sergey M Kozlov; Gábor Kovács; Riccardo Ferrando; Konstantin M Neyman
Journal:  Chem Sci       Date:  2015-04-02       Impact factor: 9.825

5.  A New Genetic Algorithm Approach Applied to Atomic and Molecular Cluster Studies.

Authors:  Frederico T Silva; Mateus X Silva; Jadson C Belchior
Journal:  Front Chem       Date:  2019-11-05       Impact factor: 5.221

  5 in total

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