Literature DB >> 23945688

Tracking niche variation over millennial timescales in sympatric killer whale lineages.

Andrew D Foote1, Jason Newton, María C Ávila-Arcos, Marie-Louise Kampmann, Jose A Samaniego, Klaas Post, Aqqalu Rosing-Asvid, Mikkel-Holger S Sinding, M Thomas P Gilbert.   

Abstract

Niche variation owing to individual differences in ecology has been hypothesized to be an early stage of sympatric speciation. Yet to date, no study has tracked niche width over more than a few generations. In this study, we show the presence of isotopic niche variation over millennial timescales and investigate the evolutionary outcomes. Isotopic ratios were measured from tissue samples of sympatric killer whale Orcinus orca lineages from the North Sea, spanning over 10 000 years. Isotopic ratios spanned a range similar to the difference in isotopic values of two known prey items, herring Clupea harengus and harbour seal Phoca vitulina. Two proxies of the stage of speciation, lineage sorting of mitogenomes and genotypic clustering, were both weak to intermediate indicating that speciation has made little progress. Thus, our study confirms that even with the necessary ecological conditions, i.e. among-individual variation in ecology, it is difficult for sympatric speciation to progress in the face of gene flow. In contrast to some theoretical models, our empirical results suggest that sympatric speciation driven by among-individual differences in ecological niche is a slow process and may not reach completion. We argue that sympatric speciation is constrained in this system owing to the plastic nature of the behavioural traits under selection when hunting either mammals or fish.

Entities:  

Keywords:  Orcinus orca; ancient DNA; niche; speciation; stable isotopes

Mesh:

Year:  2013        PMID: 23945688      PMCID: PMC3757978          DOI: 10.1098/rspb.2013.1481

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  31 in total

1.  Comparative support for the niche variation hypothesis that more generalized populations also are more heterogeneous.

Authors:  Daniel I Bolnick; Richard Svanbäck; Márcio S Araújo; Lennart Persson
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-30       Impact factor: 11.205

Review 2.  Evidence for ecological speciation and its alternative.

Authors:  Dolph Schluter
Journal:  Science       Date:  2009-02-06       Impact factor: 47.728

Review 3.  Ecological explanations for (incomplete) speciation.

Authors:  Patrik Nosil; Luke J Harmon; Ole Seehausen
Journal:  Trends Ecol Evol       Date:  2009-01-29       Impact factor: 17.712

4.  Ecological, morphological and genetic divergence of sympatric North Atlantic killer whale populations.

Authors:  Andrew D Foote; Jason Newton; Stuart B Piertney; Eske Willerslev; M Thomas P Gilbert
Journal:  Mol Ecol       Date:  2009-12       Impact factor: 6.185

5.  Assortative mating by diet in a phenotypically unimodal but ecologically variable population of stickleback.

Authors:  Lisa K Snowberg; Daniel I Bolnick
Journal:  Am Nat       Date:  2008-11       Impact factor: 3.926

6.  jModelTest: phylogenetic model averaging.

Authors:  David Posada
Journal:  Mol Biol Evol       Date:  2008-04-08       Impact factor: 16.240

7.  The Sequence Alignment/Map format and SAMtools.

Authors:  Heng Li; Bob Handsaker; Alec Wysoker; Tim Fennell; Jue Ruan; Nils Homer; Gabor Marth; Goncalo Abecasis; Richard Durbin
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

8.  Niche expansion leads to small-scale adaptive divergence along an elevation gradient in a medium-sized passerine bird.

Authors:  John E McCormack; Thomas B Smith
Journal:  Proc Biol Sci       Date:  2008-09-22       Impact factor: 5.349

9.  AdapterRemoval: easy cleaning of next-generation sequencing reads.

Authors:  Stinus Lindgreen
Journal:  BMC Res Notes       Date:  2012-07-02

10.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

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  5 in total

Review 1.  Reconstructing ancient genomes and epigenomes.

Authors:  Ludovic Orlando; M Thomas P Gilbert; Eske Willerslev
Journal:  Nat Rev Genet       Date:  2015-06-09       Impact factor: 53.242

2.  Ecological opportunities and specializations shaped genetic divergence in a highly mobile marine top predator.

Authors:  Marie Louis; Michael C Fontaine; Jérôme Spitz; Erika Schlund; Willy Dabin; Rob Deaville; Florence Caurant; Yves Cherel; Christophe Guinet; Benoit Simon-Bouhet
Journal:  Proc Biol Sci       Date:  2014-11-22       Impact factor: 5.349

Review 3.  Barcoding the largest animals on Earth: ongoing challenges and molecular solutions in the taxonomic identification of ancient cetaceans.

Authors:  Camilla Speller; Youri van den Hurk; Anne Charpentier; Ana Rodrigues; Armelle Gardeisen; Barbara Wilkens; Krista McGrath; Keri Rowsell; Luke Spindler; Matthew Collins; Michael Hofreiter
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-09-05       Impact factor: 6.237

4.  Phylogenomics of the killer whale indicates ecotype divergence in sympatry.

Authors:  A E Moura; J G Kenny; R R Chaudhuri; M A Hughes; R R Reisinger; P J N de Bruyn; M E Dahlheim; N Hall; A R Hoelzel
Journal:  Heredity (Edinb)       Date:  2014-07-23       Impact factor: 3.821

5.  Population genomics of the killer whale indicates ecotype evolution in sympatry involving both selection and drift.

Authors:  Andre E Moura; John G Kenny; Roy Chaudhuri; Margaret A Hughes; Andreanna J Welch; Ryan R Reisinger; P J Nico de Bruyn; Marilyn E Dahlheim; Neil Hall; A Rus Hoelzel
Journal:  Mol Ecol       Date:  2014-10-12       Impact factor: 6.185

  5 in total

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