Literature DB >> 23944414

Synchronization of stochastic oscillators in biochemical systems.

Joseph D Challenger1, Alan J McKane.   

Abstract

We investigate the synchronization of stochastic oscillations in biochemical models by calculating the complex coherence function within the linear noise approximation. The method is illustrated on a simple example and then applied to study the synchronization of chemical concentrations in social amoeba. The degree to which variation of rate constants in different cells and the volume of the cells affects synchronization of the oscillations is explored and the phase lag calculated. In all cases the analytical results are shown to be in good agreement with those obtained through numerical simulations.

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Year:  2013        PMID: 23944414     DOI: 10.1103/PhysRevE.88.012107

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  3 in total

1.  Intrinsic noise, Delta-Notch signalling and delayed reactions promote sustained, coherent, synchronized oscillations in the presomitic mesoderm.

Authors:  Joseph W Baron; Tobias Galla
Journal:  J R Soc Interface       Date:  2019-11-27       Impact factor: 4.118

2.  Calcium waves in a grid of clustered channels with synchronous IP3 binding and unbinding.

Authors:  M Rückl; S Rüdiger
Journal:  Eur Phys J E Soft Matter       Date:  2016-11-17       Impact factor: 1.890

3.  Frequency spectrum of chemical fluctuation: A probe of reaction mechanism and dynamics.

Authors:  Sanggeun Song; Gil-Suk Yang; Seong Jun Park; Sungguan Hong; Ji-Hyun Kim; Jaeyoung Sung
Journal:  PLoS Comput Biol       Date:  2019-09-16       Impact factor: 4.475

  3 in total

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