Literature DB >> 23941964

Modelling amyloid fibril formation kinetics: mechanisms of nucleation and growth.

J E Gillam1, C E MacPhee.   

Abstract

Amyloid and amyloid-like fibrils are self-assembling protein nanostructures, of interest for their robust material properties and inherent biological compatibility as well as their putative role in a number of debilitating mammalian disorders. Understanding fibril formation is essential to the development of strategies to control, manipulate or prevent fibril growth. As such, this area of research has attracted significant attention over the last half century. This review describes a number of different models that have been formulated to describe the kinetics of fibril assembly. We describe the macroscopic implications of mechanisms in which secondary processes such as secondary nucleation, fragmentation or branching dominate the assembly pathway, compared to mechanisms dominated by the influence of primary nucleation. We further describe how experimental data can be analysed with respect to the predictions of kinetic models.

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Year:  2013        PMID: 23941964     DOI: 10.1088/0953-8984/25/37/373101

Source DB:  PubMed          Journal:  J Phys Condens Matter        ISSN: 0953-8984            Impact factor:   2.333


  27 in total

1.  Protein Polymerization into Fibrils from the Viewpoint of Nucleation Theory.

Authors:  Dimo Kashchiev
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

2.  What Can the Kinetics of Amyloid Fibril Formation Tell about Off-pathway Aggregation?

Authors:  Rosa Crespo; Eva Villar-Alvarez; Pablo Taboada; Fernando A Rocha; Ana M Damas; Pedro M Martins
Journal:  J Biol Chem       Date:  2015-11-24       Impact factor: 5.157

3.  A multi-pathway perspective on protein aggregation: implications for control of the rate and extent of amyloid formation.

Authors:  Damien Hall; József Kardos; Herman Edskes; John A Carver; Yuji Goto
Journal:  FEBS Lett       Date:  2015-01-31       Impact factor: 4.124

4.  Inferring Mechanistic Parameters from Amyloid Formation Kinetics by Approximate Bayesian Computation.

Authors:  Eri Nakatani-Webster; Abhinav Nath
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

Review 5.  Reductionist Approach in Peptide-Based Nanotechnology.

Authors:  Ehud Gazit
Journal:  Annu Rev Biochem       Date:  2018-06-20       Impact factor: 23.643

Review 6.  Prion-Like Characteristics of Polyglutamine-Containing Proteins.

Authors:  Margaret M P Pearce; Ron R Kopito
Journal:  Cold Spring Harb Perspect Med       Date:  2018-02-01       Impact factor: 6.915

Review 7.  Factors affecting the physical stability (aggregation) of peptide therapeutics.

Authors:  Karolina L Zapadka; Frederik J Becher; A L Gomes Dos Santos; Sophie E Jackson
Journal:  Interface Focus       Date:  2017-10-20       Impact factor: 3.906

8.  Single-Molecular Heteroamyloidosis of Human Islet Amyloid Polypeptide.

Authors:  Aleksandr Kakinen; Yanting Xing; Nuwan Hegoda Arachchi; Ibrahim Javed; Lei Feng; Ava Faridi; Alon M Douek; Yunxiang Sun; Jan Kaslin; Thomas P Davis; Michael J Higgins; Feng Ding; Pu Chun Ke
Journal:  Nano Lett       Date:  2019-08-29       Impact factor: 11.189

9.  RETRACTED: Peptide-induced formation of protein aggregates and amyloid fibrils in human and guinea pig αA-crystallins under physiological conditions of temperature and pH.

Authors:  Anbarasu Kumarasamy; Sivakumar Jeyarajan; Jonathan Cheon; Anthony Premceski; Eric Seidel; Victoria A Kimler; Frank J Giblin
Journal:  Exp Eye Res       Date:  2018-11-15       Impact factor: 3.467

10.  A Free Energy Barrier Caused by the Refolding of an Oligomeric Intermediate Controls the Lag Time of Amyloid Formation by hIAPP.

Authors:  Arnaldo L Serrano; Justin P Lomont; Ling-Hsien Tu; Daniel P Raleigh; Martin T Zanni
Journal:  J Am Chem Soc       Date:  2017-11-07       Impact factor: 15.419

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