Literature DB >> 23928421

Diversity and evolution of ABC proteins in basidiomycetes.

Andriy Kovalchuk1, Yong-Hwan Lee, Fred O Asiegbu.   

Abstract

ABC proteins constitute one of the largest families of proteins. They are implicated in wide variety of cellular processes ranging from ribosome biogenesis to multidrug resistance. With the advance of fungal genomics, the number of known fungal ABC proteins increases rapidly but the information on their biological functions remains scarce. In this work we extended the previous analysis of fungal ABC proteins to include recently sequenced species of basidiomycetes. We performed an identification and initial cataloging of ABC proteins from 23 fungal species representing 10 orders within class Agaricomycotina. We identified more than 1000 genes coding for ABC proteins. Comparison of sets of ABC proteins present in basidiomycetes and ascomycetes revealed the existence of two groups of ABC proteins specific for basidiomycetes. Results of survey should contribute to the better understanding of evolution of ABC proteins in fungi and support further experimental work on their characterization.

Entities:  

Keywords:  ABC transporters; fungi; multidrug transporters; protein family evolution

Mesh:

Substances:

Year:  2013        PMID: 23928421     DOI: 10.3852/13-001

Source DB:  PubMed          Journal:  Mycologia        ISSN: 0027-5514            Impact factor:   2.696


  4 in total

1.  De novo transcriptomic assembly and profiling of Rigidoporus microporus during saprotrophic growth on rubber wood.

Authors:  Abbot O Oghenekaro; Tommaso Raffaello; Andriy Kovalchuk; Fred O Asiegbu
Journal:  BMC Genomics       Date:  2016-03-15       Impact factor: 3.969

2.  Transcriptional Network in Colletotrichum gloeosporioides Mutants Lacking Msb2 or Msb2 and Sho1.

Authors:  Na Liu; Fanli Meng; Chengming Tian
Journal:  J Fungi (Basel)       Date:  2022-02-21

3.  Diversity and evolution of ABC proteins in mycorrhiza-forming fungi.

Authors:  Andriy Kovalchuk; Annegret Kohler; Francis Martin; Fred O Asiegbu
Journal:  BMC Evol Biol       Date:  2015-12-28       Impact factor: 3.260

4.  Exploring the biological roles of Dothideomycetes ABC proteins: Leads from their phylogenetic relationships with functionally-characterized Ascomycetes homologs.

Authors:  Gaurav Dube; Narendra Kadoo; Ramya Prashant
Journal:  PLoS One       Date:  2018-08-02       Impact factor: 3.240

  4 in total

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