Literature DB >> 23927577

Effect of a monofunctional phenanthriplatin-DNA adduct on RNA polymerase II transcriptional fidelity and translesion synthesis.

Matthew W Kellinger1, Ga Young Park, Jenny Chong, Stephen J Lippard, Dong Wang.   

Abstract

Transcription inhibition by platinum anticancer drugs is an important component of their mechanism of action. Phenanthriplatin, a cisplatin derivative containing phenanthridine in place of one of the chloride ligands, forms highly potent monofunctional adducts on DNA having a structure and spectrum of anticancer activity distinct from those of the parent drug. Understanding the functional consequences of DNA damage by phenanthriplatin for the normal functions of RNA polymerase II (Pol II), the major cellular transcription machinery component, is an important step toward elucidating its mechanism of action. In this study, we present the first systematic mechanistic investigation that addresses how a site-specific phenanthriplatin-DNA d(G) monofunctional adduct affects the Pol II elongation and transcriptional fidelity checkpoint steps. Pol II processing of the phenanthriplatin lesion differs significantly from that of the canonical cisplatin-DNA 1,2-d(GpG) intrastrand cross-link. A majority of Pol II elongation complexes stall after successful addition of CTP opposite the phenanthriplatin-dG adduct in an error-free manner, with specificity for CTP incorporation being essentially the same as for undamaged dG on the template. A small portion of Pol II undergoes slow, error-prone bypass of the phenanthriplatin-dG lesion, which resembles DNA polymerases that similarly switch from high-fidelity replicative DNA processing (error-free) to low-fidelity translesion DNA synthesis (error-prone) at DNA damage sites. These results provide the first insights into how the Pol II transcription machinery processes the most abundant DNA lesion of the monofunctional phenanthriplatin anticancer drug candidate and enrich our general understanding of Pol II transcription fidelity maintenance, lesion bypass, and transcription-derived mutagenesis. Because of the current interest in monofunctional, DNA-damaging metallodrugs, these results are of likely relevance to a broad spectrum of next-generation anticancer agents being developed by the medicinal inorganic chemistry community.

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Year:  2013        PMID: 23927577      PMCID: PMC3791135          DOI: 10.1021/ja405475y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  53 in total

1.  Mechanism of translesion transcription by RNA polymerase II and its role in cellular resistance to DNA damage.

Authors:  Celine Walmacq; Alan C M Cheung; Maria L Kireeva; Lucyna Lubkowska; Chengcheng Ye; Deanna Gotte; Jeffrey N Strathern; Thomas Carell; Patrick Cramer; Mikhail Kashlev
Journal:  Mol Cell       Date:  2012-03-08       Impact factor: 17.970

2.  Phenanthriplatin, a monofunctional DNA-binding platinum anticancer drug candidate with unusual potency and cellular activity profile.

Authors:  Ga Young Park; Justin J Wilson; Ying Song; Stephen J Lippard
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-06       Impact factor: 11.205

Review 3.  Contending with transcriptional arrest during RNAPII transcript elongation.

Authors:  Jesper Q Svejstrup
Journal:  Trends Biochem Sci       Date:  2007-03-08       Impact factor: 13.807

4.  Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.

Authors:  Jasmin F Sydow; Florian Brueckner; Alan C M Cheung; Gerke E Damsma; Stefan Dengl; Elisabeth Lehmann; Dmitry Vassylyev; Patrick Cramer
Journal:  Mol Cell       Date:  2009-06-26       Impact factor: 17.970

5.  Dynamics of pyrophosphate ion release and its coupled trigger loop motion from closed to open state in RNA polymerase II.

Authors:  Lin-Tai Da; Dong Wang; Xuhui Huang
Journal:  J Am Chem Soc       Date:  2012-01-24       Impact factor: 15.419

Review 6.  Cellular processing of platinum anticancer drugs.

Authors:  Dong Wang; Stephen J Lippard
Journal:  Nat Rev Drug Discov       Date:  2005-04       Impact factor: 84.694

7.  Rpb9 subunit controls transcription fidelity by delaying NTP sequestration in RNA polymerase II.

Authors:  Celine Walmacq; Maria L Kireeva; Jordan Irvin; Yuri Nedialkov; Lucyna Lubkowska; Francisco Malagon; Jeffrey N Strathern; Mikhail Kashlev
Journal:  J Biol Chem       Date:  2009-05-13       Impact factor: 5.157

Review 8.  The resurgence of platinum-based cancer chemotherapy.

Authors:  Lloyd Kelland
Journal:  Nat Rev Cancer       Date:  2007-07-12       Impact factor: 60.716

Review 9.  Transcription-coupled DNA repair: two decades of progress and surprises.

Authors:  Philip C Hanawalt; Graciela Spivak
Journal:  Nat Rev Mol Cell Biol       Date:  2008-12       Impact factor: 94.444

10.  5-formylcytosine and 5-carboxylcytosine reduce the rate and substrate specificity of RNA polymerase II transcription.

Authors:  Matthew W Kellinger; Chun-Xiao Song; Jenny Chong; Xing-Yu Lu; Chuan He; Dong Wang
Journal:  Nat Struct Mol Biol       Date:  2012-07-22       Impact factor: 15.369

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  29 in total

Review 1.  Third row transition metals for the treatment of cancer.

Authors:  Timothy C Johnstone; Kogularamanan Suntharalingam; Stephen J Lippard
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2015-03-13       Impact factor: 4.226

2.  Mechanism of DNA alkylation-induced transcriptional stalling, lesion bypass, and mutagenesis.

Authors:  Liang Xu; Wei Wang; Jiabin Wu; Ji Hyun Shin; Pengcheng Wang; Ilona Christy Unarta; Jenny Chong; Yinsheng Wang; Dong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-07       Impact factor: 11.205

Review 3.  Molecular basis of transcriptional fidelity and DNA lesion-induced transcriptional mutagenesis.

Authors:  Liang Xu; Linati Da; Steven W Plouffe; Jenny Chong; Eric Kool; Dong Wang
Journal:  DNA Repair (Amst)       Date:  2014-04-21

4.  Phenanthriplatin Acts As a Covalent Poison of Topoisomerase II Cleavage Complexes.

Authors:  Imogen A Riddell; Keli Agama; Ga Young Park; Yves Pommier; Stephen J Lippard
Journal:  ACS Chem Biol       Date:  2016-10-06       Impact factor: 5.100

Review 5.  RNA polymerase II transcriptional fidelity control and its functional interplay with DNA modifications.

Authors:  Liang Xu; Wei Wang; Jenny Chong; Ji Hyun Shin; Jun Xu; Dong Wang
Journal:  Crit Rev Biochem Mol Biol       Date:  2015-09-22       Impact factor: 8.250

6.  Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II.

Authors:  Wei Wang; Celine Walmacq; Jenny Chong; Mikhail Kashlev; Dong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-27       Impact factor: 11.205

7.  RNA polymerase II senses obstruction in the DNA minor groove via a conserved sensor motif.

Authors:  Liang Xu; Wei Wang; Deanna Gotte; Fei Yang; Alissa A Hare; Timothy R Welch; Benjamin C Li; Ji Hyun Shin; Jenny Chong; Jeffrey N Strathern; Peter B Dervan; Dong Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

8.  Tobacco Mosaic Virus Delivery of Phenanthriplatin for Cancer therapy.

Authors:  Anna E Czapar; Yao-Rong Zheng; Imogen A Riddell; Sourabh Shukla; Samuel G Awuah; Stephen J Lippard; Nicole F Steinmetz
Journal:  ACS Nano       Date:  2016-03-28       Impact factor: 15.881

9.  Structural and mechanistic studies of polymerase η bypass of phenanthriplatin DNA damage.

Authors:  Mark T Gregory; Ga Young Park; Timothy C Johnstone; Young-Sam Lee; Wei Yang; Stephen J Lippard
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-09       Impact factor: 11.205

Review 10.  The Next Generation of Platinum Drugs: Targeted Pt(II) Agents, Nanoparticle Delivery, and Pt(IV) Prodrugs.

Authors:  Timothy C Johnstone; Kogularamanan Suntharalingam; Stephen J Lippard
Journal:  Chem Rev       Date:  2016-02-11       Impact factor: 60.622

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