Literature DB >> 23903824

Genetic burden in multiple sclerosis families.

N Isobe1, V Damotte1,2, V Lo Re3, M Ban3, D Pappas1, L Guillot-Noel2, I Rebeix2,4, A Compston3, T Mack5, W Cozen5, B Fontaine2,4, S L Hauser1, J R Oksenberg1, S Sawcer3, P-A Gourraud1.   

Abstract

A previous study using cumulative genetic risk estimations in multiple sclerosis (MS) successfully tracked the aggregation of susceptibility variants in multi-case and single-case families. It used a limited description of susceptibility loci available at the time (17 loci). Even though the full roster of MS risk genes remains unavailable, we estimated the genetic burden in MS families and assess its disease predictive power using up to 64 single-nucleotide polymorphism (SNP) markers according to the most recent literature. A total of 708 controls, 3251 MS patients and their relatives, as well as 117 twin pairs were genotyped. We validated the increased aggregation of genetic burden in multi-case compared with single-case families (P=4.14e-03) and confirm that these data offer little opportunity to accurately predict MS, even within sibships (area under receiver operating characteristic (AUROC)=0.59 (0.55, 0.53)). Our results also suggest that the primary progressive and relapsing-type forms of MS share a common genetic architecture (P=0.368; difference being limited to that corresponding to ± 2 typical MS-associated SNPs). We have confirmed the properties of individual genetic risk score in MS. Comparing with previous reference point for MS genetics (17 SNPs), we underlined the corrective consequences of the integration of the new findings from GWAS and meta-analysis.

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Year:  2013        PMID: 23903824      PMCID: PMC4102601          DOI: 10.1038/gene.2013.37

Source DB:  PubMed          Journal:  Genes Immun        ISSN: 1466-4879            Impact factor:   2.676


  29 in total

1.  SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap.

Authors:  Andrew D Johnson; Robert E Handsaker; Sara L Pulit; Marcia M Nizzari; Christopher J O'Donnell; Paul I W de Bakker
Journal:  Bioinformatics       Date:  2008-10-30       Impact factor: 6.937

2.  Genetic basis for clinical expression in multiple sclerosis.

Authors:  L F Barcellos; J R Oksenberg; A J Green; P Bucher; J B Rimmler; S Schmidt; M E Garcia; R R Lincoln; M A Pericak-Vance; J L Haines; S L Hauser
Journal:  Brain       Date:  2002-01       Impact factor: 13.501

3.  Risk alleles for multiple sclerosis identified by a genomewide study.

Authors:  David A Hafler; Alastair Compston; Stephen Sawcer; Eric S Lander; Mark J Daly; Philip L De Jager; Paul I W de Bakker; Stacey B Gabriel; Daniel B Mirel; Adrian J Ivinson; Margaret A Pericak-Vance; Simon G Gregory; John D Rioux; Jacob L McCauley; Jonathan L Haines; Lisa F Barcellos; Bruce Cree; Jorge R Oksenberg; Stephen L Hauser
Journal:  N Engl J Med       Date:  2007-07-29       Impact factor: 91.245

Review 4.  The genetics of multiple sclerosis: SNPs to pathways to pathogenesis.

Authors:  Jorge R Oksenberg; Sergio E Baranzini; Stephen Sawcer; Stephen L Hauser
Journal:  Nat Rev Genet       Date:  2008-06-10       Impact factor: 53.242

5.  Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.

Authors:  Sergio E Baranzini; Joanne Wang; Rachel A Gibson; Nicholas Galwey; Yvonne Naegelin; Frederik Barkhof; Ernst-Wilhelm Radue; Raija L P Lindberg; Bernard M G Uitdehaag; Michael R Johnson; Aspasia Angelakopoulou; Leslie Hall; Jill C Richardson; Rab K Prinjha; Achim Gass; Jeroen J G Geurts; Jolijn Kragt; Madeleine Sombekke; Hugo Vrenken; Pamela Qualley; Robin R Lincoln; Refujia Gomez; Stacy J Caillier; Michaela F George; Hourieh Mousavi; Rosa Guerrero; Darin T Okuda; Bruce A C Cree; Ari J Green; Emmanuelle Waubant; Douglas S Goodin; Daniel Pelletier; Paul M Matthews; Stephen L Hauser; Ludwig Kappos; Chris H Polman; Jorge R Oksenberg
Journal:  Hum Mol Genet       Date:  2008-11-14       Impact factor: 6.150

6.  Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants.

Authors:  Paul R Burton; David G Clayton; Lon R Cardon; Nick Craddock; Panos Deloukas; Audrey Duncanson; Dominic P Kwiatkowski; Mark I McCarthy; Willem H Ouwehand; Nilesh J Samani; John A Todd; Peter Donnelly; Jeffrey C Barrett; Dan Davison; Doug Easton; David M Evans; Hin-Tak Leung; Jonathan L Marchini; Andrew P Morris; Chris C A Spencer; Martin D Tobin; Antony P Attwood; James P Boorman; Barbara Cant; Ursula Everson; Judith M Hussey; Jennifer D Jolley; Alexandra S Knight; Kerstin Koch; Elizabeth Meech; Sarah Nutland; Christopher V Prowse; Helen E Stevens; Niall C Taylor; Graham R Walters; Neil M Walker; Nicholas A Watkins; Thilo Winzer; Richard W Jones; Wendy L McArdle; Susan M Ring; David P Strachan; Marcus Pembrey; Gerome Breen; David St Clair; Sian Caesar; Katharine Gordon-Smith; Lisa Jones; Christine Fraser; Elaine K Green; Detelina Grozeva; Marian L Hamshere; Peter A Holmans; Ian R Jones; George Kirov; Valentina Moskivina; Ivan Nikolov; Michael C O'Donovan; Michael J Owen; David A Collier; Amanda Elkin; Anne Farmer; Richard Williamson; Peter McGuffin; Allan H Young; I Nicol Ferrier; Stephen G Ball; Anthony J Balmforth; Jennifer H Barrett; Timothy D Bishop; Mark M Iles; Azhar Maqbool; Nadira Yuldasheva; Alistair S Hall; Peter S Braund; Richard J Dixon; Massimo Mangino; Suzanne Stevens; John R Thompson; Francesca Bredin; Mark Tremelling; Miles Parkes; Hazel Drummond; Charles W Lees; Elaine R Nimmo; Jack Satsangi; Sheila A Fisher; Alastair Forbes; Cathryn M Lewis; Clive M Onnie; Natalie J Prescott; Jeremy Sanderson; Christopher G Matthew; Jamie Barbour; M Khalid Mohiuddin; Catherine E Todhunter; John C Mansfield; Tariq Ahmad; Fraser R Cummings; Derek P Jewell; John Webster; Morris J Brown; Mark G Lathrop; John Connell; Anna Dominiczak; Carolina A Braga Marcano; Beverley Burke; Richard Dobson; Johannie Gungadoo; Kate L Lee; Patricia B Munroe; Stephen J Newhouse; Abiodun Onipinla; Chris Wallace; Mingzhan Xue; Mark Caulfield; Martin Farrall; Anne Barton; Ian N Bruce; Hannah Donovan; Steve Eyre; Paul D Gilbert; Samantha L Hilder; Anne M Hinks; Sally L John; Catherine Potter; Alan J Silman; Deborah P M Symmons; Wendy Thomson; Jane Worthington; David B Dunger; Barry Widmer; Timothy M Frayling; Rachel M Freathy; Hana Lango; John R B Perry; Beverley M Shields; Michael N Weedon; Andrew T Hattersley; Graham A Hitman; Mark Walker; Kate S Elliott; Christopher J Groves; Cecilia M Lindgren; Nigel W Rayner; Nicolas J Timpson; Eleftheria Zeggini; Melanie Newport; Giorgio Sirugo; Emily Lyons; Fredrik Vannberg; Adrian V S Hill; Linda A Bradbury; Claire Farrar; Jennifer J Pointon; Paul Wordsworth; Matthew A Brown; Jayne A Franklyn; Joanne M Heward; Matthew J Simmonds; Stephen C L Gough; Sheila Seal; Michael R Stratton; Nazneen Rahman; Maria Ban; An Goris; Stephen J Sawcer; Alastair Compston; David Conway; Muminatou Jallow; Melanie Newport; Giorgio Sirugo; Kirk A Rockett; Suzannah J Bumpstead; Amy Chaney; Kate Downes; Mohammed J R Ghori; Rhian Gwilliam; Sarah E Hunt; Michael Inouye; Andrew Keniry; Emma King; Ralph McGinnis; Simon Potter; Rathi Ravindrarajah; Pamela Whittaker; Claire Widden; David Withers; Niall J Cardin; Dan Davison; Teresa Ferreira; Joanne Pereira-Gale; Ingeleif B Hallgrimsdo'ttir; Bryan N Howie; Zhan Su; Yik Ying Teo; Damjan Vukcevic; David Bentley; Matthew A Brown; Alastair Compston; Martin Farrall; Alistair S Hall; Andrew T Hattersley; Adrian V S Hill; Miles Parkes; Marcus Pembrey; Michael R Stratton; Sarah L Mitchell; Paul R Newby; Oliver J Brand; Jackie Carr-Smith; Simon H S Pearce; R McGinnis; A Keniry; P Deloukas; John D Reveille; Xiaodong Zhou; Anne-Marie Sims; Alison Dowling; Jacqueline Taylor; Tracy Doan; John C Davis; Laurie Savage; Michael M Ward; Thomas L Learch; Michael H Weisman; Mathew Brown
Journal:  Nat Genet       Date:  2007-10-21       Impact factor: 38.330

7.  TNF receptor 1 genetic risk mirrors outcome of anti-TNF therapy in multiple sclerosis.

Authors:  Adam P Gregory; Calliope A Dendrou; Kathrine E Attfield; Aiden Haghikia; Dionysia K Xifara; Falk Butter; Gereon Poschmann; Gurman Kaur; Lydia Lambert; Oliver A Leach; Simone Prömel; Divya Punwani; James H Felce; Simon J Davis; Ralf Gold; Finn C Nielsen; Richard M Siegel; Matthias Mann; John I Bell; Gil McVean; Lars Fugger
Journal:  Nature       Date:  2012-08-23       Impact factor: 49.962

8.  IL2RA genetic heterogeneity in multiple sclerosis and type 1 diabetes susceptibility and soluble interleukin-2 receptor production.

Authors:  Lisa M Maier; Christopher E Lowe; Jason Cooper; Kate Downes; David E Anderson; Christopher Severson; Pamela M Clark; Brian Healy; Neil Walker; Cristin Aubin; Jorge R Oksenberg; Stephen L Hauser; Alistair Compston; Stephen Sawcer; Philip L De Jager; Linda S Wicker; John A Todd; David A Hafler
Journal:  PLoS Genet       Date:  2009-01-02       Impact factor: 5.917

9.  Interleukin 7 receptor alpha chain (IL7R) shows allelic and functional association with multiple sclerosis.

Authors:  Simon G Gregory; Silke Schmidt; Puneet Seth; Jorge R Oksenberg; John Hart; Angela Prokop; Stacy J Caillier; Maria Ban; An Goris; Lisa F Barcellos; Robin Lincoln; Jacob L McCauley; Stephen J Sawcer; D A S Compston; Benedicte Dubois; Stephen L Hauser; Mariano A Garcia-Blanco; Margaret A Pericak-Vance; Jonathan L Haines
Journal:  Nat Genet       Date:  2007-07-29       Impact factor: 38.330

10.  Identification of a novel risk locus for multiple sclerosis at 13q31.3 by a pooled genome-wide scan of 500,000 single nucleotide polymorphisms.

Authors:  Manuel Comabella; David W Craig; Montse Camiña-Tato; Carlos Morcillo; Cristina Lopez; Arcadi Navarro; Jordi Rio; Xavier Montalban; Roland Martin
Journal:  PLoS One       Date:  2008-10-22       Impact factor: 3.240

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  17 in total

Review 1.  Whole-Exome Sequencing and Whole-Genome Sequencing in Critically Ill Neonates Suspected to Have Single-Gene Disorders.

Authors:  Laurie D Smith; Laurel K Willig; Stephen F Kingsmore
Journal:  Cold Spring Harb Perspect Med       Date:  2015-12-18       Impact factor: 6.915

Review 2.  Precision medicine in chronic disease management: The multiple sclerosis BioScreen.

Authors:  Pierre-Antoine Gourraud; Roland G Henry; Bruce A C Cree; Jason C Crane; Antoine Lizee; Marram P Olson; Adam V Santaniello; Esha Datta; Alyssa H Zhu; Carolyn J Bevan; Jeffrey M Gelfand; Jennifer S Graves; Douglas S Goodin; Ari J Green; H-Christian von Büdingen; Emmanuelle Waubant; Scott S Zamvil; Elizabeth Crabtree-Hartman; Sarah Nelson; Sergio E Baranzini; Stephen L Hauser
Journal:  Ann Neurol       Date:  2014-10-14       Impact factor: 10.422

3.  Association of HLA Genetic Risk Burden With Disease Phenotypes in Multiple Sclerosis.

Authors:  Noriko Isobe; Anisha Keshavan; Pierre-Antoine Gourraud; Alyssa H Zhu; Esha Datta; Regina Schlaeger; Stacy J Caillier; Adam Santaniello; Antoine Lizée; Daniel S Himmelstein; Sergio E Baranzini; Jill Hollenbach; Bruce A C Cree; Stephen L Hauser; Jorge R Oksenberg; Roland G Henry
Journal:  JAMA Neurol       Date:  2016-07-01       Impact factor: 18.302

4.  Genetic predictors of relapse rate in pediatric MS.

Authors:  Jennifer S Graves; Lisa F Barcellos; Xiaorong Shao; Janelle Noble; Ellen M Mowry; Hong Quach; Anita Belman; T Charles Casper; Lauren B Krupp; Emmanuelle Waubant
Journal:  Mult Scler       Date:  2016-01-14       Impact factor: 6.312

5.  Inferring disease risk genes from sequencing data in multiplex pedigrees through sharing of rare variants.

Authors:  Alexandre Bureau; Ferdouse Begum; Margaret A Taub; Jacqueline B Hetmanski; Margaret M Parker; Hasan Albacha-Hejazi; Alan F Scott; Jeffrey C Murray; Mary L Marazita; Joan E Bailey-Wilson; Terri H Beaty; Ingo Ruczinski
Journal:  Genet Epidemiol       Date:  2018-09-24       Impact factor: 2.135

6.  Impact of MS genetic loci on familial aggregation, clinical phenotype, and disease prediction.

Authors:  Federica Esposito; Clara Guaschino; Melissa Sorosina; Ferdinando Clarelli; Laura Ferre'; Elisabetta Mascia; Silvia Santoro; Matteo Pagnesi; Marta Radaelli; Bruno Colombo; Lucia Moiola; Mariaemma Rodegher; Elia Stupka; Vittorio Martinelli; Giancarlo Comi; Filippo Martinelli Boneschi
Journal:  Neurol Neuroimmunol Neuroinflamm       Date:  2015-07-09

7.  The refinement of genetic predictors of multiple sclerosis.

Authors:  Giulio Disanto; Ruth Dobson; Julia Pakpoor; Ramyiadarsini I Elangovan; Rocco Adiutori; Jens Kuhle; Gavin Giovannoni
Journal:  PLoS One       Date:  2014-05-02       Impact factor: 3.240

8.  Genetic susceptibility to multiple sclerosis: interactions between conserved extended haplotypes of the MHC and other susceptibility regions.

Authors:  D S Goodin; P Khankhanian; P A Gourraud; N Vince
Journal:  BMC Med Genomics       Date:  2021-07-10       Impact factor: 3.063

9.  Liver kinase B1 rs9282860 polymorphism and risk for multiple sclerosis in White and Black Americans.

Authors:  Anne I Boullerne; Mitchell T Wallin; William J Culpepper; Heidi Maloni; Elizabeth A Boots; Dagmar M Sweeney; Douglas L Feinstein
Journal:  Mult Scler Relat Disord       Date:  2021-08-02       Impact factor: 4.808

Review 10.  Recent advances and future challenges in the genetics of multiple sclerosis.

Authors:  Christina M Lill
Journal:  Front Neurol       Date:  2014-07-14       Impact factor: 4.003

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