Literature DB >> 23903549

Comparison of the FDA-approved CDC DENV-1-4 real-time reverse transcription-PCR with a laboratory-developed assay for dengue virus detection and serotyping.

Jesse J Waggoner1, Janaki Abeynayake, Malaya K Sahoo, Lionel Gresh, Yolanda Tellez, Karla Gonzalez, Gabriela Ballesteros, Frances P Guo, Angel Balmaseda, Kumudu Karunaratne, Eva Harris, Benjamin A Pinsky.   

Abstract

Dengue virus (DENV) is the agent of the most common vector-borne disease worldwide. Using 199 clinical samples collected from Nicaragua and Sri Lanka, a laboratory-developed DENV multiplex real-time reverse transcription-PCR (rRT-PCR) proved more clinically sensitive than the FDA-approved CDC assay for DENV serotypes 1 to 4 when measured against a composite reference standard, with sensitivities of 97.4% versus 87.1%, respectively.

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Year:  2013        PMID： 23903549      PMCID： PMC3811623          DOI： 10.1128/JCM.01359-13

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  15 in total

1.  Comparison of the Idaho Technology FilmArray system to real-time PCR for detection of respiratory pathogens in children.

Authors:  Virginia M Pierce; Michael Elkan; Marilyn Leet; Karin L McGowan; Richard L Hodinka
Journal:  J Clin Microbiol       Date:  2011-11-23       Impact factor: 5.948

2.  Dengue typing assay based on real-time PCR using SYBR Green I.

Authors:  Salin Chutinimitkul; Sunchai Payungporn; Apiradee Theamboonlers; Yong Poovorawan
Journal:  J Virol Methods       Date:  2005-10       Impact factor: 2.014

Review 3.  Clinical and laboratory features that distinguish dengue from other febrile illnesses in endemic populations.

Authors:  James A Potts; Alan L Rothman
Journal:  Trop Med Int Health       Date:  2008-09-16       Impact factor: 2.622

4.  Performance evaluation of the new Roche Cobas AmpliPrep/Cobas TaqMan HIV-1 test version 2.0 for quantification of human immunodeficiency virus type 1 RNA.

Authors:  Suzan Pas; John W A Rossen; Daniel Schoener; Diana Thamke; Annika Pettersson; Reiner Babiel; Martin Schutten
Journal:  J Clin Microbiol       Date:  2010-02-17       Impact factor: 5.948

5.  Highly sensitive detection of dengue virus nucleic acid in samples from clinically ill patients.

Authors:  Jorge L Muñoz-Jordán; Cynthia S Collins; Edgardo Vergne; Gilberto A Santiago; Lyle Petersen; Wellington Sun; Jeffrey M Linnen
Journal:  J Clin Microbiol       Date:  2009-02-18       Impact factor: 5.948

6.  Pan-dengue virus detection by PCR for travelers returning from the tropics.

Authors:  Alexis Dumoulin; Hanspeter Marti; Marcus Panning; Christoph Hatz; Hans H Hirsch
Journal:  J Clin Microbiol       Date:  2008-07-23       Impact factor: 5.948

7.  Development of an internally controlled real-time reverse transcriptase PCR assay for pan-dengue virus detection and comparison of four molecular dengue virus detection assays.

Authors:  Jesse J Waggoner; Janaki Abeynayake; Malaya K Sahoo; Lionel Gresh; Yolanda Tellez; Karla Gonzalez; Gabriela Ballesteros; Angel Balmaseda; Kumudu Karunaratne; Eva Harris; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2013-05-01       Impact factor: 5.948

8.  Early clinical features of dengue virus infection in nicaraguan children: a longitudinal analysis.

Authors:  Hope H Biswas; Oscar Ortega; Aubree Gordon; Katherine Standish; Angel Balmaseda; Guillermina Kuan; Eva Harris
Journal:  PLoS Negl Trop Dis       Date:  2012-03-06

9.  Single-reaction, multiplex, real-time rt-PCR for the detection, quantitation, and serotyping of dengue viruses.

Authors:  Jesse J Waggoner; Janaki Abeynayake; Malaya K Sahoo; Lionel Gresh; Yolanda Tellez; Karla Gonzalez; Gabriela Ballesteros; Anna M Pierro; Paolo Gaibani; Frances P Guo; Vittorio Sambri; Angel Balmaseda; Kumudu Karunaratne; Eva Harris; Benjamin A Pinsky
Journal:  PLoS Negl Trop Dis       Date:  2013-04-18

10.  Development of real time PCR for detection and quantitation of Dengue Viruses.

Authors:  K R Gurukumar; D Priyadarshini; J A Patil; A Bhagat; A Singh; P S Shah; D Cecilia
Journal:  Virol J       Date:  2009-01-23       Impact factor: 4.099
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  27 in total

1.  Comparison of Four Serological Methods and Two Reverse Transcription-PCR Assays for Diagnosis and Surveillance of Zika Virus Infection.

Authors:  Angel Balmaseda; José Victor Zambrana; Damaris Collado; Nadezna García; Saira Saborío; Douglas Elizondo; Juan Carlos Mercado; Karla Gonzalez; Cristhiam Cerpas; Andrea Nuñez; Davide Corti; Jesse J Waggoner; Guillermina Kuan; Raquel Burger-Calderon; Eva Harris
Journal:  J Clin Microbiol       Date:  2018-02-22       Impact factor: 5.948

2.  Reply to "Inconclusive reverse transcription-PCR assay comparison for dengue virus detection and serotyping".

Authors:  Jesse J Waggoner; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2014-05       Impact factor: 5.948

3.  Inconclusive reverse transcription-PCR assay comparison for dengue virus detection and serotyping.

Authors:  Jorge L Muñoz-Jordán; Gilberto A Santiago
Journal:  J Clin Microbiol       Date:  2014-05       Impact factor: 5.948

4.  Evaluation of protection induced by a dengue virus serotype 2 envelope domain III protein scaffold/DNA vaccine in non-human primates.

Authors:  Sean P McBurney; Justine E Sunshine; Sarah Gabriel; Jeremy P Huynh; William F Sutton; Deborah H Fuller; Nancy L Haigwood; William B Messer
Journal:  Vaccine       Date:  2016-04-13       Impact factor: 3.641

5.  Homotypic Dengue Virus Reinfections in Nicaraguan Children.

Authors:  Jesse J Waggoner; Angel Balmaseda; Lionel Gresh; Malaya K Sahoo; Magelda Montoya; Chunling Wang; Janaki Abeynayake; Guillermina Kuan; Benjamin A Pinsky; Eva Harris
Journal:  J Infect Dis       Date:  2016-03-16       Impact factor: 5.226

6.  Multiplex nucleic acid amplification test for diagnosis of dengue fever, malaria, and leptospirosis.

Authors:  Jesse J Waggoner; Janaki Abeynayake; Ilana Balassiano; Martina Lefterova; Malaya K Sahoo; Yuanyuan Liu; Juliana Magalhães Vital-Brazil; Lionel Gresh; Angel Balmaseda; Eva Harris; Niaz Banaei; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2014-03-26       Impact factor: 5.948

7.  Field-deployable viral diagnostics using CRISPR-Cas13.

Authors:  Cameron Myhrvold; Catherine A Freije; Jonathan S Gootenberg; Omar O Abudayyeh; Hayden C Metsky; Ann F Durbin; Max J Kellner; Amanda L Tan; Lauren M Paul; Leda A Parham; Kimberly F Garcia; Kayla G Barnes; Bridget Chak; Adriano Mondini; Mauricio L Nogueira; Sharon Isern; Scott F Michael; Ivette Lorenzana; Nathan L Yozwiak; Bronwyn L MacInnis; Irene Bosch; Lee Gehrke; Feng Zhang; Pardis C Sabeti
Journal:  Science       Date:  2018-04-27       Impact factor: 47.728

8.  Characterization of Dengue Virus Infections Among Febrile Children Clinically Diagnosed With a Non-Dengue Illness, Managua, Nicaragua.

Authors:  Jesse J Waggoner; Lionel Gresh; Alisha Mohamed-Hadley; Angel Balmaseda; K James Soda; Janaki Abeynayake; Malaya K Sahoo; Yuanyuan Liu; Guillermina Kuan; Eva Harris; Benjamin A Pinsky
Journal:  J Infect Dis       Date:  2017-06-15       Impact factor: 5.226

9.  Clinical evaluation of a single-reaction real-time RT-PCR for pan-dengue and chikungunya virus detection.

Authors:  Jesse J Waggoner; Gabriela Ballesteros; Lionel Gresh; Alisha Mohamed-Hadley; Yolanda Tellez; Malaya K Sahoo; Janaki Abeynayake; Angel Balmaseda; Eva Harris; Benjamin A Pinsky
Journal:  J Clin Virol       Date:  2016-02-27       Impact factor: 3.168

10.  Development and Validation of a Quantitative, One-Step, Multiplex, Real-Time Reverse Transcriptase PCR Assay for Detection of Dengue and Chikungunya Viruses.

Authors:  Monika Simmons; Todd Myers; Carolina Guevara; Donald Jungkind; Maya Williams; Huo-Shu Houng
Journal:  J Clin Microbiol       Date:  2016-04-20       Impact factor: 5.948
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