Literature DB >> 23900003

Pseudogenes and their composers: delving in the 'debris' of human genome.

Kamalika Sen1, Tapash Chandra Ghosh.   

Abstract

Pseudogenes, the nonfunctional homologs of functional genes and thus exemplified as 'genomic fossils' provide intriguing snapshots of the evolutionary history of human genome. These defunct copies generally arise by retrotransposition or duplication followed by various genetic disablements. In this study, focusing on human pseudogenes and their functional homologues we describe their characteristic features and relevance to protein sequence evolution. We recapitulate that pseudogenes harbor disease-causing degenerative sequence variations in conjunction with the immense disease gene association of their progenitors. Furthermore, we also discuss the issue of functional resurrection and the potentiality observed in some pseudogenes to regulate their functional counterparts.

Entities:  

Keywords:  disease genes; evolutionary rate; human genome; pseudogenes

Mesh:

Year:  2013        PMID: 23900003     DOI: 10.1093/bfgp/elt026

Source DB:  PubMed          Journal:  Brief Funct Genomics        ISSN: 2041-2649            Impact factor:   4.241


  9 in total

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Review 2.  Rehabilitation of the P2X5 receptor: a re-evaluation of structure and function.

Authors:  Brian F King
Journal:  Purinergic Signal       Date:  2022-10-24       Impact factor: 3.950

Review 3.  The persistent contributions of RNA to eukaryotic gen(om)e architecture and cellular function.

Authors:  Jürgen Brosius
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-31       Impact factor: 10.005

Review 4.  Expression of evolutionarily novel genes in tumors.

Authors:  A P Kozlov
Journal:  Infect Agent Cancer       Date:  2016-07-19       Impact factor: 2.965

5.  CRISPR-Directed Therapeutic Correction at the NCF1 Locus Is Challenged by Frequent Incidence of Chromosomal Deletions.

Authors:  Dominik Wrona; Oleksandr Pastukhov; Robert S Pritchard; Federica Raimondi; Joëlle Tchinda; Martin Jinek; Ulrich Siler; Janine Reichenbach
Journal:  Mol Ther Methods Clin Dev       Date:  2020-04-25       Impact factor: 6.698

6.  The neurodevelopmental gene MSANTD2 belongs to a gene family formed by recurrent molecular domestication of Harbinger transposons at the base of vertebrates.

Authors:  Ema Etchegaray; Dominique Baas; Magali Naville; Zofia Haftek-Terreau; Jean Nicolas Volff
Journal:  Mol Biol Evol       Date:  2022-08-17       Impact factor: 8.800

7.  Comprehensive analysis of LDHAP5 pseudogene expression and potential pathogenesis in ovarian serous cystadenocarcinoma.

Authors:  Shitong Lin; Yifan Meng; Canhui Cao; Ping Wu; Peipei Gao; Wenhua Zhi; Ting Peng; Peng Wu
Journal:  Cancer Cell Int       Date:  2020-06-10       Impact factor: 5.722

8.  DiseaseLinc: Disease Enrichment Analysis of Sets of Differentially Expressed LincRNAs.

Authors:  Piyush More; Sweta Talyan; Jean-Fred Fontaine; Enrique M Muro; Miguel A Andrade-Navarro
Journal:  Cells       Date:  2021-03-29       Impact factor: 6.600

9.  PΨFinder: a practical tool for the identification and visualization of novel pseudogenes in DNA sequencing data.

Authors:  Sanna Abrahamsson; Frida Eiengård; Anna Rohlin; Marcela Dávila López
Journal:  BMC Bioinformatics       Date:  2022-02-03       Impact factor: 3.169

  9 in total

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