| Literature DB >> 23894436 |
Surabhi S Liyanage1, Bayzidur Rahman, Iman Ridda, Anthony T Newall, Sepehr N Tabrizi, Suzanne M Garland, Eva Segelov, Holly Seale, Philip J Crowe, Aye Moa, C Raina Macintyre.
Abstract
BACKGROUND: The aetiological role of human papillomavirus (HPV) in oesophageal squamous cell carcinoma (OSCC) has been widely researched for more than three decades, with conflicting findings. In the absence of a large, adequately powered single case-control study, a meta-analysis of all available case-control studies is the most rigorous way of identifying any potential association between HPV and OSCC. We present the first global meta-analysis of case-control studies investigating the role of HPV in OSCC.Entities:
Mesh:
Year: 2013 PMID: 23894436 PMCID: PMC3722293 DOI: 10.1371/journal.pone.0069238
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Case-control studies examining HPV DNA in OSCCa.
| REFERENCE | COUNTRY | HPV DETECTON METHOD | HPV TYPES DETECTED | POSITIVE NO OF CASES (%) | POSITIVE NO OF CONTROLS (%) | OR (95% CONFIDENCE INTERVAL)1,2 | P VALUE | TOTAL QUALITY SCORE3 |
| Williamson | S. Africa | PCR | Various | 6/14 (43) | 6/41 (15) | 4.38 (1.11–17.18) | 0.0272 | 46 |
| Cooper | S. Africa | ISH | 6,11,18,31,33 | 25/48 (52) | 0/2 (0) | Incalculable | 0.1489 | 52 |
| Khurshid | Japan | PCR | CP,16,18 | 17/27 (63) | 3/12 (25) | 5.1 (1.11–23.37) | 0.0286 | 60 |
| Agarwal | India | ISH, IHC | 16,18 | 19/30 (63) | 2/10 (20) | 6.91 (1.24–38.52) | 0.0175 | 33 |
| Farhadi | Iran | PCR | 16,18 | 8/38 (21) | 5/38 (13) | 1.76 (0.52–5.97) | 0.3608 | 44 |
| Antonsson | Australia | PCR | 16, 35 | 8/222 (4) | 0/55 (0) | Incalculable | 0.1531 | 61 |
| Fidalgo | Portugal | PCR | 16,18 | 9/16 (56) | 0/10 (0) | Incalculable | 0.0034 | 39 |
| Lenhart | USA | ISH, IHC | 6,11,16,18,31,33 | 4/12 (33) | 0/12 (0) | Incalculable | 0.0285 | 54 |
| Koh | Korea | PCR | 16 | 0/102 (0) | 0/40 (0) | Incalculable | Incalculable | 35 |
| Lambot | Belgium | PCR | CP | 1/21 (2) | 0/5 (0) | Incalculable | 0.6188 | 22 |
| Benamouzig | France | ISH | 6,11,16,18,31,33 | 4/12 (33) | 1/24 (4) | 11.5 (1.11–118.71) | 0.0171 | 35 |
| Ashworth., 1993 | UK | ISH | 6,11,16,18,31,33 | 0/4 (0) | 0/10 (0) | Incalculable | Incalculable | 28 |
| Weston | Brazil | HCII | HR & LR | 1/40 (2.5) | 1/10 (10) | 0.23 (0.01–4.05) | 0.2790 | 44 |
| Souto Damin | Brazil | PCR | 16,18 | 26/165 (16) | 0/26 (0) | Incalculable | 0.0294 | 47 |
| Lyronis | Greece | PCR | 16,18,other | 17/30 (56) | 6/27 (22) | 4.58 (1.44–14.59) | 0.0081 | 44 |
| Li | China | PCR, ISH | 16 | 2/2 (100) | 66/112 (59) | Incalculable | 0.2406 | 53 |
| Guimaraes | China | PCR | CP | 2/32 (6) | 4/57 (7) | 0.88 (0.15–5.11) | 0.8898 | 65 |
| Cao | China | PCR | 16,18 | 207/265 (78) | 203/357 (57) | 2.71 (1.89–3.88) | <0.0001 | 46 |
| Gao | China | ISH | nil | 0/4 (0) | 61/475 (13) | Incalculable | Incalculable | 67 |
| Liu | China | PCR | 16 | 35/69 (51) | 2/32 (6) | 15.44 (3.42–69.70) | <0.0001 | 46 |
| Zhang | China | PCR | 16,18,58 | 35/70 (50) | 20/60 (33) | 2.00 (0.98–4.08) | 0.0552 | 55 |
OR – odds ratio; CP – consensus primers; HCII – Hybrid Capture 2; IHC – immunohistochemistry; ISH – in situ hybridization; LR – Low–risk HPV types; HR- High risk HPV types; PCR – Polymerase chain reaction. aSome of the data included in the table have been described in one of our previous publications [4].1All odds ratios in this table are unadjusted and have been calculated using STATA, except for 2 studies (Cao et al and Gao et al) where authors of the respective paper calculated adjusted odds ratios.2Some papers have ORs and p-values deemed as ‘incalculable’ due to one or more of the four components for OR calculation being a zero value. 3Maximum possible total score for a study was 100.
Figure 1Consort diagram for the study selection.
Average quality scores and inter-observer agreement on scoring for all studies included in the meta-analysis.
| Average (%) of the maximum category quality score (range) | ||
| Categories of quality scoring (maximum points value) | Case-control studies (n = 21) | Inter-cluster correlation (ICCs) for inter-observer agreement (95% CI) |
| Selection (40 points) | 29 (0–67) | 0.93 (0.82 to 0.97) |
| Measurement (40 points) | 82 (56–100) | 0.53 (−0.11 to 0.81) |
| Adjustment for confounding (15 points) | 11 (0–73) | 0.91 (0.77 to 0.96) |
| Analysis (5 points) | 10 (0–100) | 0.88 (0.70 to 0.95) |
| Total (100 points) | 46 (22–67) | 0.87 (0.62 to 0.95) |
Figure 2Forest plot for meta-analysis of the association of HPV with oesophageal squamous cell carcinoma in 21 case-control studies.
Results of meta-regression analysis of OR for HPV-OSCC association on scores from quality domains of all studies included in the meta-analysis.
| Item in quality score | Regression co-efficient (95% CI) | P-value |
| Selection | −0.0165737 (−0.05 to 0.02) | 0.325 |
| Measurement | 0.0433383 (−0.03 to 0.12) | 0.274 |
| Confounding | −0.028375 (−0.11 to 0.06) | 0.521 |
| Analysis | −0.0407042 (−0.15 to 0.06) | 0.449 |
| Total score | −0.0261726 (−0.07 to 0.01) | 0.212 |
Figure 3Cumulative meta-analysis of case control studies for the evidence of HPV involvement in OSCC.
Figure 4Influence analysis for individual studies on the summary effect.
Figure 5Funnel plot for analysis results of publication bias.
Figure 6Forest plot and meta-analysis by region of OSCC risk level.