Literature DB >> 23891707

Mode of action of acetylxylan esterases on acetyl glucuronoxylan and acetylated oligosaccharides generated by a GH10 endoxylanase.

Peter Biely1, Mária Cziszárová, Iveta Uhliariková, Jane W Agger, Xin-Liang Li, Vincent G H Eijsink, Bjorge Westereng.   

Abstract

BACKGROUND: Substitutions on the xylan main chain are widely accepted to limit plant cell wall degradability and acetylations are considered as one of the most important obstacles. Hence, understanding the modes of action of a range of acetylxylan esterases (AcXEs) is of ample importance not only to increase the understanding of the enzymology of plant decay/bioremediation but also to enable efficient bioconversion of plant biomass.
METHODS: In this study, the modes of action of acetylxylan esterases (AcXEs) belonging to carbohydrate esterase (CE) families 1, 4, 5 and 6 on xylooligosaccharides generated from hardwood acetyl glucuronoxylan were compared using MALDI ToF MS. Supporting data were obtained by following enzymatic deacetylation by (1)H NMR spectroscopy.
CONCLUSIONS: None of the used enzymes were capable of complete deacetylation, except from linear xylooligosaccharides which were completely deacetylated by some of the esterases in the presence of endoxylanase. A clear difference was observed between the performance of the serine-type esterases of CE families 1, 5 and 6, and the aspartate-metalloesterases of family CE4. The difference is mainly due to the inability of CE4 AcXEs to catalyze deacetylation of 2,3-di-O-acetylated xylopyranosyl residues. Complete deacetylation of a hardwood acetyl glucuronoxylan requires additional deacetylating enzyme(s). GENERAL SIGNIFICANCE: The results contribute to the understanding of microbial degradation of plant biomass and outline the way to achieve complete saccharification of plant hemicelluloses which did not undergo alkaline pretreatment.
© 2013.

Entities:  

Keywords:  4-O-methyl-d-glucuronic acid or 4-O-methyl-d-glucuronosyl; 4-O-methyl-d-glucuronosyl–α-1,2-d-xylopyranosyl–β-1,4-xylopyranosyl–β-1,4-xylopyranose (the upper index indicates the number of the xylosyl residues from the reducing end substituted with MeGlcA); AcXE; Acetyl glucuronoxylan; Acetylxylan esterase; CE; Carbohydrate esterase family; HexXyl(x)Ac(y); MALDI ToF MS; MeGlcA; MeGlcA(3)Xyl(3); MeGlcAXyl(x)Ac(y); NMR; Positional specificity; UXyl(x)Ac(y); Xyl(2)–Xyl(7); Xyl(x)Ac(y); Xylp; acetylated aldouronic acid containing one MeGlcA, x xylose residues and y acetyl groups; acetylated β-1,4-xylooligosaccharide containing x xylose residues and y acetyl groups; acetylxylan esterase; carbohydrate esterase; d-xylopyranose or d-xylopyranosyl; oligosaccharide containing an unknown component U, x xylose residues and y acetyl groups; oligosaccharide containing one hexopyranose residue of unknown nature, x xylose residues and y acetyl groups; β-1,4-xylobiose–β-1,4-xyloheptaose

Mesh:

Substances:

Year:  2013        PMID: 23891707     DOI: 10.1016/j.bbagen.2013.07.018

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  13 in total

1.  A new versatile microarray-based method for high throughput screening of carbohydrate-active enzymes.

Authors:  Silvia Vidal-Melgosa; Henriette L Pedersen; Julia Schückel; Grégory Arnal; Claire Dumon; Daniel B Amby; Rune Nygaard Monrad; Bjørge Westereng; William G T Willats
Journal:  J Biol Chem       Date:  2015-02-05       Impact factor: 5.157

2.  A pair of esterases from a commensal gut bacterium remove acetylations from all positions on complex β-mannans.

Authors:  Leszek Michalak; Sabina Leanti La Rosa; Shaun Leivers; Lars Jordhøy Lindstad; Åsmund Kjendseth Røhr; Finn Lillelund Aachmann; Bjørge Westereng
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-13       Impact factor: 11.205

3.  A new generation of versatile chromogenic substrates for high-throughput analysis of biomass-degrading enzymes.

Authors:  Stjepan Krešimir Kračun; Julia Schückel; Bjørge Westereng; Lisbeth Garbrecht Thygesen; Rune Nygaard Monrad; Vincent G H Eijsink; William George Tycho Willats
Journal:  Biotechnol Biofuels       Date:  2015-04-23       Impact factor: 6.040

4.  Structure and function of a broad-specificity chitin deacetylase from Aspergillus nidulans FGSC A4.

Authors:  Zhanliang Liu; Laurie M Gay; Tina R Tuveng; Jane W Agger; Bjørge Westereng; Geir Mathiesen; Svein J Horn; Gustav Vaaje-Kolstad; Daan M F van Aalten; Vincent G H Eijsink
Journal:  Sci Rep       Date:  2017-05-11       Impact factor: 4.379

5.  Wood-Derived Dietary Fibers Promote Beneficial Human Gut Microbiota.

Authors:  Sabina Leanti La Rosa; Vasiliki Kachrimanidou; Fanny Buffetto; Phillip B Pope; Nicholas A Pudlo; Eric C Martens; Robert A Rastall; Glenn R Gibson; Bjørge Westereng
Journal:  mSphere       Date:  2019-01-23       Impact factor: 4.389

6.  Positional preferences of acetyl esterases from different CE families towards acetylated 4-O-methyl glucuronic acid-substituted xylo-oligosaccharides.

Authors:  Klaus G Neumüller; Adriana Carvalho de Souza; Jozef Hj van Rijn; Hugo Streekstra; Harry Gruppen; Henk A Schols
Journal:  Biotechnol Biofuels       Date:  2015-01-22       Impact factor: 6.040

7.  The pattern of xylan acetylation suggests xylan may interact with cellulose microfibrils as a twofold helical screw in the secondary plant cell wall of Arabidopsis thaliana.

Authors:  Marta Busse-Wicher; Thiago C F Gomes; Theodora Tryfona; Nino Nikolovski; Katherine Stott; Nicholas J Grantham; David N Bolam; Munir S Skaf; Paul Dupree
Journal:  Plant J       Date:  2014-07-15       Impact factor: 6.417

8.  Characterization of Heterologously Expressed Acetyl Xylan Esterase1 Isolated from the Anaerobic Rumen Fungus Neocallimastix frontalis PMA02.

Authors:  Mi Kwon; Jaeyong Song; Hong-Seog Park; Hyunjin Park; Jongsoo Chang
Journal:  Asian-Australas J Anim Sci       Date:  2016-06-11       Impact factor: 2.509

Review 9.  Substrate Recognition and Specificity of Chitin Deacetylases and Related Family 4 Carbohydrate Esterases.

Authors:  Hugo Aragunde; Xevi Biarnés; Antoni Planas
Journal:  Int J Mol Sci       Date:  2018-01-30       Impact factor: 5.923

10.  Effects of pH on steam explosion extraction of acetylated galactoglucomannan from Norway spruce.

Authors:  Leszek Michalak; Svein Halvor Knutsen; Ida Aarum; Bjørge Westereng
Journal:  Biotechnol Biofuels       Date:  2018-11-09       Impact factor: 6.040

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