| Literature DB >> 23885195 |
Solangy Usme-Romero1, Milena Alonso, Helena Hernandez-Cuervo, Emilio J Yunis, Juan J Yunis.
Abstract
We analyzed the frequency of four mitochondrial DNA haplogroups in 424 individuals from 21 Colombian Amerindian tribes. Our results showed a high degree of mtDNA diversity and genetic heterogeneity. Frequencies of mtDNA haplogroups A and C were high in the majority of populations studied. The distribution of these four mtDNA haplogroups from Amerindian populations was different in the northern region of the country compared to those in the south. Haplogroup A was more frequently found among Amerindian tribes in northern Colombia, while haplogroup D was more frequent among tribes in the south. Haplogroups A, C and D have clinal tendencies in Colombia and South America in general. Populations belonging to the Chibcha linguistic family of Colombia and other countries nearby showed a strong genetic differentiation from the other populations tested, thus corroborating previous findings. Genetically, the Ingano, Paez and Guambiano populations are more closely related to other groups of south eastern Colombia, as also inferred from other genetic markers and from archeological data. Strong evidence for a correspondence between geographical and linguistic classification was found, and this is consistent with evidence that gene flow and the exchange of customs and knowledge and language elements between groups is facilitated by close proximity.Entities:
Keywords: Amerindian; Chibcha; Colombia; genetic relationships; mitochondrial DNA
Year: 2013 PMID: 23885195 PMCID: PMC3715279 DOI: 10.1590/S1415-47572013005000011
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771
Geographic location, sample size and linguistic classification for 21 Colombian Amerindian tribes analyzed.
| mtDNA haplogroups (%)
| Linguistic classification | Geographic location (Department / region) | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Population | n | A | B | C | D | E | h | ||
| Chimila | 21 | 95.2 | 4.8 | 0.0 | 0.0 | 0.0 | 0.0952 | Chibcha | Magdalena/ Caribbean region |
| Arsario | 8 | 0.0 | 12.5 | 75.0 | 0.0 | 12.5 | 0.4643 | Chibcha | Magdalena / Caribbean region |
| Kogui | 32 | 71.9 | 0.0 | 28.1 | 0.0 | 0.0 | 0.4173 | Chibcha | Cesar / Caribbean region |
| Arhuaco | 21 | 90.4 | 4.8 | 4.8 | 0.0 | 0.0 | 0.1857 | Chibcha | Cesar / Caribbean region |
| Embera | 21 | 9.5 | 52.4 | 28.6 | 9.5 | 0.0 | 0.6571 | Choco-Chibcha | Chocó / Pacific region |
| Ingano | 48 | 39.6 | 35.4 | 22.9 | 2.1 | 0.0 | 0.5326 | Andean | Putumayo / Amazonian region |
| Guambiano | 24 | 4.2 | 12.5 | 66.6 | 16.7 | 0.0 | 0.6791 | Without Classification | Cauca /Pacific region |
| Páez | 36 | 27.8 | 8.3 | 27.8 | 33.3 | 2.8 | 0.7476 | Without Classification | Cauca /Pacific region |
| Wayuu | 17 | 29.4 | 17.6 | 47.1 | 0.0 | 5.9 | 0.6985 | Tucano-ecuatorial | Guajira / Caribbean region |
| Tucano | 14 | 7.1 | 21.4 | 7.1 | 57.1 | 7.1 | 0.6593 | Tucano-ecuatorial | Vaupés-Guainía/ Orinoquian region |
| Guanana | 10 | 20.0 | 0.0 | 20.0 | 50.0 | 10.0 | 0.7333 | Tucano-ecuatorial | Vaupés-Guainía/ Orinoquian region |
| Cubeo | 24 | 33.3 | 8.3 | 29.2 | 25.0 | 4.2 | 0.7645 | Tucano-ecuatorial | Vaupés-Guainía/ Orinoquian region |
| Curripaco | 22 | 4.5 | 40.9 | 36.4 | 13.7 | 4.5 | 0.7100 | Tucano-ecuatorial | Vaupés-Guainía/ Orinoquian region |
| Desano | 20 | 15.0 | 15.0 | 45.0 | 25.0 | 0.0 | 0.7263 | Tucano-ecuatorial | Vaupés-Guainía/ Orinoquian region |
| Barasano | 5 | 80.0 | 0.0 | 0.0 | 20.0 | 0.0 | 0.4000 | Tucano-ecuatorial | Vaupés / Orinoquian region |
| Tatuyo | 10 | 40.0 | 0.0 | 50.0 | 10.0 | 0.0 | 0.6444 | Tucano-ecuatorial | Vaupés / Orinoquian region |
| Piratapuyo | 8 | 12.5 | 12.5 | 50.0 | 12.5 | 12.5 | 0.7857 | Tucano-ecuatorial | Vaupés / Orinoquian region |
| Tuyuca | 6 | 17.0 | 50.0 | 0.0 | 17.0 | 16.0 | 0.8000 | Tucano-ecuatorial | Vaupés / Orinoquian Region |
| Puinave | 61 | 8.2 | 50.8 | 32.8 | 6.6 | 1.6 | 0.6333 | Tucano-ecuatorial | Guainía / Orinoquian region |
| Yeral | 8 | 12.5 | 12.5 | 50.0 | 25.0 | 0.0 | 0.7500 | Tucano-ecuatorial | Guainía / Orinoquian region |
| Piapoco | 8 | 12.5 | 25.0 | 25.0 | 12.5 | 25.0 | 0.8929 | Tucano-ecuatorial | Guainía / Orinoquian region |
| Frequency | 31.0 | 22.4 | 30.4 | 13.4 | 2.8 | 0.7447 | |||
| Total | 424 | 131 | 95 | 129 | 57 | 12 | |||
Linguistic affiliations (Ruhlen, 1987).
Figure 1Mitochondrial DNA (mtDNA) haplogroup frequency for 21 Amerindian populations of Colombia.
Figure 2mtDNA Haplogroup distribution of Amerindian tribes in Colombia according to their geographic location. Data reported by Torroni , Kolman and Bermingham (1997), Merriwether , Mesa , Keyeux , Briceño , Barreto , Torres and Melton was also included.
Figure 3UPGMA tree based on FST distances for Colombian and Central and South American Amerindian tribes analyzed for mtDNA haplogroups.
Analysis of Molecular Variance (AMOVA) for mtDNA haplogroups. Grouping based on linguistics or geographical criteria for Colombian Amerindian tribes.
| Groups | AMOVA values (%) | Fixation index | ||||
|---|---|---|---|---|---|---|
|
|
| |||||
| a | b | c | FSC | FST | FCT | |
| 1. Chibchas and Non-Chibcha | 69.06 | 9.87 | 21.07 | 0.12505 | 0.30939 | 0.21069 |
| 2. All linguistic families | 77.26 | 15.83 | 6.91 | 0.17003 | 0.22739 | 0.06911 |
| 3. North East and Pacific | 72.54 | 11.26 | 16.2 | 0.13435 | 0.27458 | 0.162 |
| 4. Andes barrier | 79.2 | 17.66 | 3.14 | 0.18229 | 0.20796 | 0.03139 |
AMOVA analysis based on linguistic classification (groups 1 and 2) and geographical location (3 and 4). Group 1:Chibcha (Arsario, Kogui, Arhuaco, Chimila); Non-Chibcha (Wayuu, Curripaco, Piapoco, Yeral, Cubeo, Desano, Tatuyo, Piratapuyo, Puinave, Guanana, Ingano, Tucano). Group 2: Chibcha (Arsario, Arhuaco, Kogui, Chimila, Embera); Ecuatorial -Tucano: (Wayuu, Curripaco, Piapoco, Yeral, Cubeo, Desano, Tatuyo, Piratapuyo, Puinave, Guanana, Tucano); Andean: (Ingano). Group 3: North (Kogui, Chimila, Arsario, Arhuaco, Wayuu); Pacific (Paéz, Guambiano, Embera); East (Ingano, Cubeo, Curripaco, Desano, Yeral, Tucano, Piapoco, Puinave, Guanana, Tatuyo, Piratapuyo). Group 4: Andean mountains: (Kogui, Arhuaco, Arsario, Chimila, Wayuu, Embera, Guambiano, Paéz); Amazonian/Orinoquian (Ingano, Guanana, Curripaco, Desano, Cubeo, Tatuyo, Piratapuyo, Yeral, Piapoco, Puinave, Tucano).
Figure 4NM-MDS plot of Amerindian populations from Central and South America, Colombian African descendant and African populations. The lower circle includes most of the Chibcha Speaking groups. The circle in the middle includes the populations of African descent in Colombia, and the circle to the left includes African populations used as outgroup. For haplogroup data see Table S1.
Mantel test correlating genetic, linguistic and geographical distances for 21 Colombian Amerindian populations studied.
| Matrix 1 | Matrix 2 | r | p-value |
|---|---|---|---|
| Genetic | Linguistic | 0.156272 | 0.06825 |
| Genetic | Geographic | 0.287512 | 0.00939 |
| Linguistic | Geographic | 0.648335 | 0.00001 |