Literature DB >> 23877117

Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota.

Yongfei Hu1, Xi Yang, Junjie Qin, Na Lu, Gong Cheng, Na Wu, Yuanlong Pan, Jing Li, Liying Zhu, Xin Wang, Zhiqi Meng, Fangqing Zhao, Di Liu, Juncai Ma, Nan Qin, Chunsheng Xiang, Yonghong Xiao, Lanjuan Li, Huanming Yang, Jian Wang, Ruifu Yang, George F Gao, Jun Wang, Baoli Zhu.   

Abstract

The human gut microbiota is a reservoir of antibiotic resistance genes, but little is known about their diversity and richness within the gut. Here we analyse the antibiotic resistance genes of gut microbiota from 162 individuals. We identify a total of 1,093 antibiotic resistance genes and find that Chinese individuals harbour the highest number and abundance of antibiotic resistance genes, followed by Danish and Spanish individuals. Single-nucleotide polymorphism-based analysis indicates that antibiotic resistance genes from the two European populations are more closely related while the Chinese ones are clustered separately. We also confirm high abundance of tetracycline resistance genes with this large cohort study. Our study provides a broad view of antibiotic resistance genes in the human gut microbiota.

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Year:  2013        PMID: 23877117     DOI: 10.1038/ncomms3151

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  194 in total

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10.  Metagenomic and network analysis reveal wide distribution and co-occurrence of environmental antibiotic resistance genes.

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