Literature DB >> 23876708

A novel assay for assessing juxtamembrane and transmembrane domain interactions important for receptor heterodimerization.

Pin-Chuan Su1, Bryan W Berger.   

Abstract

Understanding the basis of specificity in receptor homodimerization versus heterodimerization is essential in determining the role receptor plays in signal transduction. Specificity in each of the interfaces formed during signal transduction involves cooperative interactions between receptor extracellular, transmembrane (TM), and cytoplasmic domains. While methods exist for studying receptor heterodimerization in cell membranes, they are limited to either TM domains expressed in an inverted orientation or capture only heterodimerization in a single assay. To address this limitation, we have developed an assay (DN-AraTM) that enables simultaneous measurement of homodimerization and heterodimerization of type I receptor domains in their native orientation, including both soluble and TM domains. Using integrin αIIb and RAGE (receptor for advanced glycation end products) as model type I receptor systems, we demonstrate both specificity and sensitivity of our approach, which will provide a novel tool to identify specific domain interactions that are important in regulating signal transduction.
© 2013.

Entities:  

Keywords:  CYTO; EX; GFP; MBP; TM; cytoplasmic; dimerization; extracellular; green fluorescent protein; maltose-binding protein; membrane proteins; protein–protein interaction assay; receptor structure–function; signal transduction; transmembrane

Mesh:

Substances:

Year:  2013        PMID: 23876708     DOI: 10.1016/j.jmb.2013.07.022

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  8 in total

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Authors:  Janessa Gerhart; Anastasia F Thévenin; Elizabeth Bloch; Kelly E King; Damien Thévenin
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2.  Membrane-enabled dimerization of the intrinsically disordered cytoplasmic domain of ADAM10.

Authors:  Wei Deng; Sungyun Cho; Pin-Chuan Su; Bryan W Berger; Renhao Li
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-27       Impact factor: 11.205

Review 3.  Applications of Single-Molecule Methods to Membrane Protein Folding Studies.

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Journal:  J Mol Biol       Date:  2017-05-23       Impact factor: 5.469

4.  Screening for transmembrane association in divisome proteins using TOXGREEN, a high-throughput variant of the TOXCAT assay.

Authors:  Claire R Armstrong; Alessandro Senes
Journal:  Biochim Biophys Acta       Date:  2016-07-22

5.  Plexin-Bs enhance their GAP activity with a novel activation switch loop generating a cooperative enzyme.

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Journal:  Cell Mol Life Sci       Date:  2020-06-29       Impact factor: 9.261

6.  Identifying ionic interactions within a membrane using BLaTM, a genetic tool to measure homo- and heterotypic transmembrane helix-helix interactions.

Authors:  Christoph Schanzenbach; Fabian C Schmidt; Patrick Breckner; Mark G Teese; Dieter Langosch
Journal:  Sci Rep       Date:  2017-03-07       Impact factor: 4.379

7.  Protein design-scapes generated by microfluidic DNA assembly elucidate domain coupling in the bacterial histidine kinase CpxA.

Authors:  Iain C Clark; Bruk Mensa; Christopher J Ochs; Nathan W Schmidt; Marco Mravic; Francisco J Quintana; William F DeGrado; Adam R Abate
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-23       Impact factor: 12.779

8.  Disrupting the transmembrane domain-mediated oligomerization of protein tyrosine phosphatase receptor J inhibits EGFR-driven cancer cell phenotypes.

Authors:  Elizabeth Bloch; Eden L Sikorski; David Pontoriero; Evan K Day; Bryan W Berger; Matthew J Lazzara; Damien Thévenin
Journal:  J Biol Chem       Date:  2019-11-01       Impact factor: 5.486

  8 in total

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