| Literature DB >> 23874442 |
Yongchun Yang1, Yinglong Liu, Yunlei Ding, Li Yi, Zhe Ma, Hongjie Fan, Chengping Lu.
Abstract
One hundred and two Streptococcus agalactiae (group B streptococcus [GBS]) isolates were collected from dairy cattle with subclinical mastitis in Eastern China during 2011. Clonal groups were established by multilocus sequence typing (MLST) and pulsed-field gel electrophoresis (PFGE), respectively. Capsular polysaccharides (CPS), pilus and alpha-like-protein (Alp) family genes were also characterized by molecular techniques. MLST analysis revealed that these isolates were limited to three clonal groups and were clustered in six different lineages, i.e. ST (sequence type) 103, ST568, ST67, ST301, ST313 and ST570, of which ST568 and ST570 were new genotypes. PFGE analysis revealed this isolates were clustered in 27 PFGE types, of which, types 7, 8, 14, 15, 16, 18, 23 and 25 were the eight major types, comprising close to 70% (71/102) of all the isolates. The most prevalent sequence types were ST103 (58% isolates) and ST568 (31% isolates), comprising capsular genotype Ia isolates without any of the detected Alp genes, suggesting the appearance of novel genomic backgrounds of prevalent strains of bovine S. agalactiae. All the strains possessed the pilus island 2b (PI-2b) gene and the prevalent capsular genotypes were types Ia (89% isolates) and II (11% isolates), the conserved pilus type providing suitable data for the development of vaccines against mastitis caused by S. agalactiae.Entities:
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Year: 2013 PMID: 23874442 PMCID: PMC3707890 DOI: 10.1371/journal.pone.0067755
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
CCs, STs, capsular genotypes, pilus types, alpha-like protein genes and PFGE types of the 102 bovine strains.
| CCsa and STb
| Allelic profilec
| Capsular genotype (No. of isolates) | Frequency (%) | PId
| Alpe gene (No. of isolates) | PFGE type (No. of isolates) | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CC67 | 10 | |||||||||||
| 67 | 13 | 1 | 1 | 13 | 1 | 1 | 5 | Ia (1) | 1 | 2b | NTf (1) | 3(1) |
| II (4) | 4 | 2b | NT (4) | 3(1), 4(1), 8(1), 13(1) | ||||||||
| 301 | 13 | 1 | 1 | 13 | 1 | 28 | 5 | II (4) | 4 | 2b |
| 1 (1), 11 (1), 12 (1), 22 (1) |
| 313 | 13 | 1 | 1 | 2 | 1 | 28 | 5 | II (1) | 1 | 2b |
| 11 (1) |
| CC64 | 2 | |||||||||||
| 570 | 16 | 1 | 1 | 2 | 1 | 1 | 5 | II (2) | 2 | 2b |
| 9(2) |
| CC103 | 88 | |||||||||||
| 103 | 16 | 1 | 6 | 2 | 9 | 9 | 2 | Ia (58) | 57 | 2b | NT (58) | 6 (1), 7 (25), 8 (5), 10 (3), 14 (8),) 15 (7), 17 (1), 18 (5), 19 (3) |
| 568 | 16 | 1 | 6 | 2 | 51 | 9 | 2 | Ia (32) | 31 | 2b | NT (32) | 2 (1), 5 (1), 12 (2), 16 (6), 20 (1), 21 (1), 23 (5), 24 (2), 25 (9), 26 (3), 27 (1) |
a CC, clonal complex. b ST, sequence type. c The allelic profiles are presented in the following order: adhP, pheS, atr, glnA, sdhA, glcK, and tkt. d PI, pilus island. Minus in this column indicates the absence of a PI-1 gene. e Alp, alpha-like protein. f NT, non-typeable.
Figure 1eBURST diagram of the population.
Each sequence type (ST) is represented as a dot. The dots positioned centrally in the cluster are primary founders (blue) or subgroup founders (yellow). Pink circles indicate STs detected from the strains in this study and are marked by solid line arrows. The 102 bovine isolates were clustered within sequence types ST103, ST568, ST67, ST301, ST313 and ST570 and grouped within three clonal complexes (CCs): CC103, CC67 and CC64. Both ST67 and ST64 were subgroups of CC17. ST568 was a single-locus variant (SLV) for ST103. ST301 and ST313 were SLVs and DLVs (two-locus variants), respectively of ST67. ST570 was a DLV of both ST64 and ST67, derived from ST64. The predicted founders that were not obtained in this study are marked by dashed arrows. For clarity, ST labels have been removed.
Figure 2Dendrogram of PFGE profiles of 102 bovine
The Dendrogram was constructed based on BioNumerics analysis of the PFGE patterns and cluster analysis using the Dice coefficient and UPGMA of the digitalized PFGE patterns for the strains. Clustering settings of 0.00% optimization and 1.5% band position tolerance were used. 568 * and 570* were identified as novel sequence types in this study.
Figure 3Typing of 102 isolates present in 21 commercial dairy farms in Eastern China.
The percentage of positive cases is shown above each bar. ST indicates the MLST sequence type; the corresponding capsular genotype/alpha-like protein type is shown in parentheses. NT, non-typeable. The PFGE types are represented by the Arabic numerals in each bar.