Literature DB >> 23865618

Morphological and ribosomal DNA-based characterization of six Antarctic ciliate morphospecies from the Amundsen Sea with phylogenetic analyses.

Sun Young Kim1, Joong Ki Choi, John R Dolan, Hyoung Chul Shin, SangHoon Lee, Eun Jin Yang.   

Abstract

We characterized six tintinnid ciliates from Antarctic waters using molecular markers and morphological traits: Amphorellopsis quinquealata, Codonellopsis gaussi, Cymatocylis convallaria, Cy. calyciformis, Cy. drygalskii, and Laackmanniella prolongata. The 100% similarity in SSU-ITS1-5.8S rDNA-ITS2-partial LSU rDNA sequences among Cy. convallaria, Cy. calyciformis, and Cy. drygalskii is supportive of synonymy. Codonellopsis gaussi and L. prolongata also showed high levels of similarity in SSU rDNA (99.83%) and the D2 domain of LSU rDNA (95.77%), suggesting that they are closely related. Phylogenetic analysis placed Cymatocylis in the Rhabdonellidae, Amphorellopsis in the Tintinnidae and L. prolongata/Co. gaussi within the Dictyocystidae.
© 2013 The Author(s) Journal of Eukaryotic Microbiology © 2013 International Society of Protistologists.

Entities:  

Keywords:  18S; 28S; Antarctica; Tintinnida; marine ciliates; planktonic ciliates; taxonomy

Mesh:

Substances:

Year:  2013        PMID: 23865618     DOI: 10.1111/jeu.12057

Source DB:  PubMed          Journal:  J Eukaryot Microbiol        ISSN: 1066-5234            Impact factor:   3.346


  5 in total

1.  Diversity Patterns of Protists Are Highly Affected by Methods Disentangling Biological Variants: A Case Study in Oligotrich (s.l.) Ciliates.

Authors:  Jiahui Xu; Jianlin Han; Hua Su; Changyu Zhu; Zijing Quan; Lei Wu; Zhenzhen Yi
Journal:  Microorganisms       Date:  2022-04-27

2.  Diversity of Microbial Eukaryotes Along the West Antarctic Peninsula in Austral Spring.

Authors:  Jean-David Grattepanche; Wade H Jeffrey; Rebecca J Gast; Robert W Sanders
Journal:  Front Microbiol       Date:  2022-05-16       Impact factor: 6.064

3.  Declines in both redundant and trace species characterize the latitudinal diversity gradient in tintinnid ciliates.

Authors:  John R Dolan; Eun Jin Yang; Sung-Ho Kang; Tae Siek Rhee
Journal:  ISME J       Date:  2016-03-18       Impact factor: 10.302

4.  Deciphering phylogenetic relationships and delimiting species boundaries using a Bayesian coalescent approach in protists: A case study of the ciliate genus Spirostomum (Ciliophora, Heterotrichea).

Authors:  Shahed Uddin Ahmed Shazib; Peter Vďačný; Marek Slovák; Eleni Gentekaki; Mann Kyoon Shin
Journal:  Sci Rep       Date:  2019-11-08       Impact factor: 4.379

5.  Three rDNA Loci-Based Phylogenies of Tintinnid Ciliates (Ciliophora, Spirotrichea, Choreotrichida).

Authors:  Qianqian Zhang; Sabine Agatha; Wuchang Zhang; Jun Dong; Ying Yu; Nianzhi Jiao; Jun Gong
Journal:  J Eukaryot Microbiol       Date:  2016-08-30       Impact factor: 3.346

  5 in total

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