Literature DB >> 23856366

Heart research advances using database search engines, Human Protein Atlas and the Sydney Heart Bank.

Amy Li1, Colleen Estigoy, Mark Raftery, Darryl Cameron, Jacob Odeberg, Fredrik Pontén, Sean Lal, Cristobal G Dos Remedios.   

Abstract

This Methodological Review is intended as a guide for research students who may have just discovered a human "novel" cardiac protein, but it may also help hard-pressed reviewers of journal submissions on a "novel" protein reported in an animal model of human heart failure. Whether you are an expert or not, you may know little or nothing about this particular protein of interest. In this review we provide a strategic guide on how to proceed. We ask: How do you discover what has been published (even in an abstract or research report) about this protein? Everyone knows how to undertake literature searches using PubMed and Medline but these are usually encyclopaedic, often producing long lists of papers, most of which are either irrelevant or only vaguely relevant to your query. Relatively few will be aware of more advanced search engines such as Google Scholar and even fewer will know about Quertle. Next, we provide a strategy for discovering if your "novel" protein is expressed in the normal, healthy human heart, and if it is, we show you how to investigate its subcellular location. This can usually be achieved by visiting the website "Human Protein Atlas" without doing a single experiment. Finally, we provide a pathway to discovering if your protein of interest changes its expression level with heart failure/disease or with ageing. Crown
Copyright © 2013. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Human Protein Atlas (HPA); Human protein discovery; Literature search engines; Quertle; Sydney Heart Bank (SHB); Tissue microarrays

Mesh:

Year:  2013        PMID: 23856366     DOI: 10.1016/j.hlc.2013.06.006

Source DB:  PubMed          Journal:  Heart Lung Circ        ISSN: 1443-9506            Impact factor:   2.975


  13 in total

1.  The evolution of Biophysical Reviews.

Authors:  Cristobal G Dos Remedios
Journal:  Biophys Rev       Date:  2016-01-15

Review 2.  Non-sarcomeric causes of heart failure: a Sydney Heart Bank perspective.

Authors:  C G Dos Remedios; A Li; S Lal
Journal:  Biophys Rev       Date:  2018-07-18

3.  Phospholamban phosphorylation, mutation, and structural dynamics: a biophysical approach to understanding and treating cardiomyopathy.

Authors:  Naa-Adjeley D Ablorh; David D Thomas
Journal:  Biophys Rev       Date:  2015-01-21

4.  Cardiac stem cells: translation to human studies.

Authors:  Zijun Ge; Sean Lal; Thi Y L Le; Cris Dos Remedios; James J H Chong
Journal:  Biophys Rev       Date:  2014-12-03

5.  Cris dos Remedios: Sydney Heart Bank and scientific mentorship beyond 2010.

Authors:  Amy Li
Journal:  Biophys Rev       Date:  2020-07-10

6.  Best Practice BioBanking of Human Heart Tissue.

Authors:  Sean Lal; Amy Li; David Allen; Paul D Allen; Paul Bannon; Tim Cartmill; Roger Cooke; Alan Farnsworth; Anne Keogh; Cristobal Dos Remedios
Journal:  Biophys Rev       Date:  2015-11-02

Review 7.  The Sydney Heart Bank: improving translational research while eliminating or reducing the use of animal models of human heart disease.

Authors:  W Linke; C G Dos Remedios; S P Lal; A Li; J McNamara; A Keogh; P S Macdonald; R Cooke; E Ehler; R Knöll; S B Marston; J Stelzer; H Granzier; C Bezzina; S van Dijk; F De Man; G J M Stienen; J Odeberg; F Pontén; J van der Velden
Journal:  Biophys Rev       Date:  2017-08-14

8.  The homozygous K280N troponin T mutation alters cross-bridge kinetics and energetics in human HCM.

Authors:  Nicoletta Piroddi; E Rosalie Witjas-Paalberends; Claudia Ferrara; Cecilia Ferrantini; Giulia Vitale; Beatrice Scellini; Paul J M Wijnker; Vasco Sequiera; Dennis Dooijes; Cristobal Dos Remedios; Saskia Schlossarek; Man Ching Leung; Andrew Messer; Douglas G Ward; Annibale Biggeri; Chiara Tesi; Lucie Carrier; Charles S Redwood; Steven B Marston; Jolanda van der Velden; Corrado Poggesi
Journal:  J Gen Physiol       Date:  2018-12-21       Impact factor: 4.086

Review 9.  Bedside-to-Bench Translational Research for Chronic Heart Failure: Creating an Agenda for Clients Who Do Not Meet Trial Enrollment Criteria.

Authors:  P Iyngkaran; M Thomas
Journal:  Clin Med Insights Cardiol       Date:  2015-08-05

10.  Pressure Overload Is Associated With Low Levels of Troponin I and Myosin Binding Protein C Phosphorylation in the Hearts of Patients With Aortic Stenosis.

Authors:  O'neal Copeland; Andrew Messer; Andrew Jabbour; Corrado Poggesi; Sanjay Prasad; Steven Marston
Journal:  Front Physiol       Date:  2020-03-19       Impact factor: 4.566

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