Literature DB >> 23851491

Genome-scale stoichiometry analysis to elucidate the innate capability of the cyanobacterium Synechocystis for electricity generation.

Longfei Mao1, Wynand S Verwoerd.   

Abstract

Synechocystis sp. PCC 6803 has been considered as a promising biocatalyst for electricity generation in recent microbial fuel cell research. However, the innate maximum current production potential and underlying metabolic pathways supporting the high current output are still unknown. This is mainly due to the fact that the high-current production cell phenotype results from the interaction among hundreds of reactions in the metabolism and it is impossible for reductionist methods to characterize the pathway selection in such a metabolic state. In this study, we employed computational metabolic techniques, flux balance analysis, and flux variability analysis, to exploit the maximum current outputs of Synechocystis sp. PCC 6803, in five electron transfer cases, namely, ferredoxin- and plastoquinol-dependent electron transfers under photoautotrophic cultivation, and NADH-dependent mediated electron transfer under photoautotrophic, heterotrophic, and mixotrophic conditions. In these five modes, the maximum current outputs were computed as 0.198, 0.7918, 0.198, 0.4652, and 0.4424 A gDW⁻¹, respectively. Comparison of the five operational modes suggests that plastoquinol-/c-type cytochrome-targeted electricity generation had an advantage of liberating the highest current output achievable for Synechocystis sp. PCC 6803. On the other hand, the analysis indicates that the currency metabolite, NADH-, dependent electricity generation can rely on a number of reactions from different pathways, and is thus more robust against environmental perturbations.

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Year:  2013        PMID: 23851491     DOI: 10.1007/s10295-013-1308-0

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  51 in total

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Authors:  Gemma Reguera; Kelly P Nevin; Julie S Nicoll; Sean F Covalla; Trevor L Woodard; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2006-08-25       Impact factor: 4.792

Review 2.  A state of the art review on microbial fuel cells: A promising technology for wastewater treatment and bioenergy.

Authors:  Zhuwei Du; Haoran Li; Tingyue Gu
Journal:  Biotechnol Adv       Date:  2007-05-23       Impact factor: 14.227

Review 3.  Exoelectrogenic bacteria that power microbial fuel cells.

Authors:  Bruce E Logan
Journal:  Nat Rev Microbiol       Date:  2009-03-30       Impact factor: 60.633

4.  Reconstruction and verification of a genome-scale metabolic model for Synechocystis sp. PCC6803.

Authors:  Katsunori Yoshikawa; Yuta Kojima; Tsubasa Nakajima; Chikara Furusawa; Takashi Hirasawa; Hiroshi Shimizu
Journal:  Appl Microbiol Biotechnol       Date:  2011-09-01       Impact factor: 4.813

5.  CyanoBase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. strain PCC6803.

Authors:  Y Nakamura; T Kaneko; M Hirosawa; N Miyajima; S Tabata
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

6.  Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms.

Authors:  Yuri A Gorby; Svetlana Yanina; Jeffrey S McLean; Kevin M Rosso; Dianne Moyles; Alice Dohnalkova; Terry J Beveridge; In Seop Chang; Byung Hong Kim; Kyung Shik Kim; David E Culley; Samantha B Reed; Margaret F Romine; Daad A Saffarini; Eric A Hill; Liang Shi; Dwayne A Elias; David W Kennedy; Grigoriy Pinchuk; Kazuya Watanabe; Shun'ichi Ishii; Bruce Logan; Kenneth H Nealson; Jim K Fredrickson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-18       Impact factor: 11.205

7.  Cytochrome c is reduced mainly by plastoquinol and not by superoxide in thylakoid membranes at low and medium light intensities: its specific interaction with thylakoid membrane lipids.

Authors:  Jerzy Kruk; Małgorzata Jemioła-Rzemińska; Kazimierz Strzałka
Journal:  Biochem J       Date:  2003-10-01       Impact factor: 3.857

8.  Light-dependent electrogenic activity of cyanobacteria.

Authors:  John M Pisciotta; Yongjin Zou; Ilia V Baskakov
Journal:  PLoS One       Date:  2010-05-25       Impact factor: 3.240

9.  Extracellular iron reduction is mediated in part by neutral red and hydrogenase in Escherichia coli.

Authors:  James B McKinlay; J Gregory Zeikus
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

10.  A new computational method to split large biochemical networks into coherent subnets.

Authors:  Wynand S Verwoerd
Journal:  BMC Syst Biol       Date:  2011-02-07
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  3 in total

1.  Theoretical exploration of optimal metabolic flux distributions for extracellular electron transfer by Shewanella oneidensis MR-1.

Authors:  Longfei Mao; Wynand S Verwoerd
Journal:  Biotechnol Biofuels       Date:  2014-08-27       Impact factor: 6.040

2.  A system-oriented strategy to enhance electron production of Synechocystis sp. PCC6803 in bio-photovoltaic devices: experimental and modeling insights.

Authors:  Hossein Firoozabadi; Mohammad Mahdi Mardanpour; Ehsan Motamedian
Journal:  Sci Rep       Date:  2021-06-10       Impact factor: 4.379

3.  Exploration and comparison of inborn capacity of aerobic and anaerobic metabolisms of Saccharomyces cerevisiae for microbial electrical current production.

Authors:  Longfei Mao; Wynand S Verwoerd
Journal:  Bioengineered       Date:  2013-08-21       Impact factor: 3.269

  3 in total

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