Literature DB >> 23842815

Inducing chaos in a gene regulatory network by coupling an oscillating dynamics with a hysteresis-type one.

Camille Poignard1.   

Abstract

In this paper, we investigate the chaotic behavior of a gene regulatory network modeled by four differential equations and seventeen parameters. This network, called [Formula: see text]-system, has been designed to couple in a simple way an oscillating system with one having a bistable switch. After having studied it analytically, we exhibit (by a constructive proof) the mechanism responsible of chaos for a general differential system presenting such a coupling. Namely, given a generic one-parameter family of smooth vector fields on [Formula: see text] presenting a Hopf bifurcation, we prove that under an assumption on the Jacobian at the bifurcation point, we can create such a chaotic system by perturbing the parameter thanks to a hysteresis-type dynamics. Finally, we numerically show that the mechanism highlighted previously takes place in the [Formula: see text]-system, for a particular set of values of its parameters.

Mesh:

Year:  2013        PMID: 23842815     DOI: 10.1007/s00285-013-0703-5

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  16 in total

1.  Network motifs in the transcriptional regulation network of Escherichia coli.

Authors:  Shai S Shen-Orr; Ron Milo; Shmoolik Mangan; Uri Alon
Journal:  Nat Genet       Date:  2002-04-22       Impact factor: 38.330

2.  Stable periodicity and negative circuits in differential systems.

Authors:  Adrien Richard; Jean-Paul Comet
Journal:  J Math Biol       Date:  2010-12-01       Impact factor: 2.259

3.  Experimental demonstration of chaos in a microbial food web.

Authors:  Lutz Becks; Frank M Hilker; Horst Malchow; Klaus Jürgens; Hartmut Arndt
Journal:  Nature       Date:  2005-06-30       Impact factor: 49.962

4.  A mathematical model for copper homeostasis in Enterococcus hirae.

Authors:  Elisabeth Pécou; Alejandro Maass; Daniel Remenik; Julien Briche; Mauricio Gonzalez
Journal:  Math Biosci       Date:  2006-04-26       Impact factor: 2.144

5.  A new necessary condition on interaction graphs for multistationarity.

Authors:  M Kaufman; C Soulé; R Thomas
Journal:  J Theor Biol       Date:  2007-06-26       Impact factor: 2.691

6.  Multistability of synthetic genetic networks with repressive cell-to-cell communication.

Authors:  Ekkehard Ullner; Aneta Koseska; Jürgen Kurths; Evgenii Volkov; Holger Kantz; Jordi García-Ojalvo
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-09-05

7.  The interaction graph structure of mass-action reaction networks.

Authors:  Mirela Domijan; Elisabeth Pécou
Journal:  J Math Biol       Date:  2011-08-21       Impact factor: 2.259

8.  Oscillatory behavior in enzymatic control processes.

Authors:  B C Goodwin
Journal:  Adv Enzyme Regul       Date:  1965

9.  Oscillations in notch signaling regulate maintenance of neural progenitors.

Authors:  Hiromi Shimojo; Toshiyuki Ohtsuka; Ryoichiro Kageyama
Journal:  Neuron       Date:  2008-04-10       Impact factor: 17.173

10.  Next-generation synthetic gene networks.

Authors:  Timothy K Lu; Ahmad S Khalil; James J Collins
Journal:  Nat Biotechnol       Date:  2009-12       Impact factor: 54.908

View more
  3 in total

1.  Periodic, Quasi-periodic and Chaotic Dynamics in Simple Gene Elements with Time Delays.

Authors:  Yoko Suzuki; Mingyang Lu; Eshel Ben-Jacob; José N Onuchic
Journal:  Sci Rep       Date:  2016-02-15       Impact factor: 4.379

2.  Pulse Generation in the Quorum Machinery of Pseudomonas aeruginosa.

Authors:  Cicik Alfiniyah; Martin A Bees; A Jamie Wood
Journal:  Bull Math Biol       Date:  2017-05-19       Impact factor: 1.758

3.  State-dependent effective interactions in oscillator networks through coupling functions with dead zones.

Authors:  Peter Ashwin; Christian Bick; Camille Poignard
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2019-10-28       Impact factor: 4.226

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.