Literature DB >> 23836901

Small-angle X-ray solution scattering study of the multi-aminoacyl-tRNA synthetase complex reveals an elongated and multi-armed particle.

José Dias1, Louis Renault, Javier Pérez, Marc Mirande.   

Abstract

In animal cells, nine aminoacyl-tRNA synthetases are associated with the three auxiliary proteins p18, p38, and p43 to form a stable and conserved large multi-aminoacyl-tRNA synthetase complex (MARS), whose molecular mass has been proposed to be between 1.0 and 1.5 MDa. The complex acts as a molecular hub for coordinating protein synthesis and diverse regulatory signal pathways. Electron microscopy studies defined its low resolution molecular envelope as an overall rather compact, asymmetric triangular shape. Here, we have analyzed the composition and homogeneity of the native mammalian MARS isolated from rabbit liver and characterized its overall internal structure, size, and shape at low resolution by hydrodynamic methods and small-angle x-ray scattering in solution. Our data reveal that the MARS exhibits a much more elongated and multi-armed shape than expected from previous reports. The hydrodynamic and structural features of the MARS are large compared with other supramolecular assemblies involved in translation, including ribosome. The large dimensions and non-compact structural organization of MARS favor a large protein surface accessibility for all its components. This may be essential to allow structural rearrangements between the catalytic and cis-acting tRNA binding domains of the synthetases required for binding the bulky tRNA substrates. This non-compact architecture may also contribute to the spatiotemporal controlled release of some of its components, which participate in non-canonical functions after dissociation from the complex.

Entities:  

Keywords:  Aminoacyl tRNA Synthetase; Protein Complexes; Protein Structure; Protein Synthesis; X-ray Scattering

Mesh:

Substances:

Year:  2013        PMID: 23836901      PMCID: PMC3745343          DOI: 10.1074/jbc.M113.489922

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  59 in total

1.  Macromolecular assemblage of aminoacyl-tRNA synthetases: quantitative analysis of protein-protein interactions and mechanism of complex assembly.

Authors:  J C Robinson; P Kerjan; M Mirande
Journal:  J Mol Biol       Date:  2000-12-15       Impact factor: 5.469

2.  A recurrent RNA-binding domain is appended to eukaryotic aminoacyl-tRNA synthetases.

Authors:  B Cahuzac; E Berthonneau; N Birlirakis; E Guittet; M Mirande
Journal:  EMBO J       Date:  2000-02-01       Impact factor: 11.598

3.  Ultrastructure of the eukaryotic aminoacyl-tRNA synthetase complex derived from two dimensional averaging and classification of negatively stained electron microscopic images.

Authors:  M T Norcum
Journal:  FEBS Lett       Date:  1999-03-26       Impact factor: 4.124

4.  Genetic dissection of protein-protein interactions in multi-tRNA synthetase complex.

Authors:  S B Rho; M J Kim; J S Lee; W Seol; H Motegi; S Kim; K Shiba
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

Review 5.  Aminoacyl-tRNA synthesis.

Authors:  M Ibba; D Soll
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

6.  Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing.

Authors:  D I Svergun
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

7.  A novel anti-tumor cytokine contains an RNA binding motif present in aminoacyl-tRNA synthetases.

Authors:  Y Kim; J Shin; R Li; C Cheong; K Kim; S Kim
Journal:  J Biol Chem       Date:  2000-09-01       Impact factor: 5.157

8.  Immunoelectron microscopic localization of glutamyl-/ prolyl-tRNA synthetase within the eukaryotic multisynthetase complex.

Authors:  M T Norcum; J D Dignam
Journal:  J Biol Chem       Date:  1999-04-30       Impact factor: 5.157

9.  Structural analysis of multifunctional peptide motifs in human bifunctional tRNA synthetase: identification of RNA-binding residues and functional implications for tandem repeats.

Authors:  E J Jeong; G S Hwang; K H Kim; M J Kim; S Kim; K S Kim
Journal:  Biochemistry       Date:  2000-12-26       Impact factor: 3.162

10.  Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling.

Authors:  P Schuck
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

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  18 in total

1.  Organization of the multiaminoacyl-tRNA synthetase complex and the cotranslational protein folding.

Authors:  Igor N Berezovsky; Zejun Zheng; Atsushi Kurotani; Alexander A Tokmakov; Igor V Kurochkin
Journal:  Protein Sci       Date:  2015-07-14       Impact factor: 6.725

2.  Assembly of Multi-tRNA Synthetase Complex via Heterotetrameric Glutathione Transferase-homology Domains.

Authors:  Ha Yeon Cho; Seo Jin Maeng; Hyo Je Cho; Yoon Seo Choi; Jeong Min Chung; Sangmin Lee; Hoi Kyoung Kim; Jong Hyun Kim; Chi-Yong Eom; Yeon-Gil Kim; Min Guo; Hyun Suk Jung; Beom Sik Kang; Sunghoon Kim
Journal:  J Biol Chem       Date:  2015-10-15       Impact factor: 5.157

3.  Retractile lysyl-tRNA synthetase-AIMP2 assembly in the human multi-aminoacyl-tRNA synthetase complex.

Authors:  Zhoufei Hei; Siqi Wu; Zaizhou Liu; Jing Wang; Pengfei Fang
Journal:  J Biol Chem       Date:  2019-02-07       Impact factor: 5.157

4.  Structural control of caspase-generated glutamyl-tRNA synthetase by appended noncatalytic WHEP domains.

Authors:  Dalia Halawani; Valentin Gogonea; Joseph A DiDonato; Vitaliy Pipich; Peng Yao; Arnab China; Celalettin Topbas; Kommireddy Vasu; Abul Arif; Stanley L Hazen; Paul L Fox
Journal:  J Biol Chem       Date:  2018-04-11       Impact factor: 5.157

Review 5.  Experimental approaches for investigation of aminoacyl tRNA synthetase phosphorylation.

Authors:  Abul Arif; Jie Jia; Dalia Halawani; Paul L Fox
Journal:  Methods       Date:  2016-10-08       Impact factor: 3.608

6.  Human lysyl-tRNA synthetase evolves a dynamic structure that can be stabilized by forming complex.

Authors:  Siqi Wu; Li Zheng; Zhoufei Hei; Jing-Bo Zhou; Guang Li; Peifeng Li; Jiayuan Wang; Hamid Ali; Xiao-Long Zhou; Jing Wang; Pengfei Fang
Journal:  Cell Mol Life Sci       Date:  2022-02-08       Impact factor: 9.261

7.  Structure and Dynamics of the Human Multi-tRNA Synthetase Complex.

Authors:  Myung Hee Kim; Beom Sik Kang
Journal:  Subcell Biochem       Date:  2022

8.  Structure of the ArgRS-GlnRS-AIMP1 complex and its implications for mammalian translation.

Authors:  Yaoyao Fu; Youngran Kim; Kyeong Sik Jin; Hyun Sook Kim; Jong Hyun Kim; DongMing Wang; Minyoung Park; Chang Hwa Jo; Nam Hoon Kwon; Doyeun Kim; Myung Hee Kim; Young Ho Jeon; Kwang Yeon Hwang; Sunghoon Kim; Yunje Cho
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-06       Impact factor: 11.205

Review 9.  Aminoacyl-tRNA synthetase complexes in evolution.

Authors:  Svitlana Havrylenko; Marc Mirande
Journal:  Int J Mol Sci       Date:  2015-03-23       Impact factor: 5.923

10.  Assembly of the novel five-component apicomplexan multi-aminoacyl-tRNA synthetase complex is driven by the hybrid scaffold protein Tg-p43.

Authors:  Jason M van Rooyen; Jean-Benjamin Murat; Pierre-Mehdi Hammoudi; Sylvie Kieffer-Jaquinod; Yohann Coute; Amit Sharma; Hervé Pelloux; Hassan Belrhali; Mohamed-Ali Hakimi
Journal:  PLoS One       Date:  2014-02-20       Impact factor: 3.240

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