Literature DB >> 23836542

Construction and use of glycan microarrays.

Christopher T Campbell1, Yalong Zhang, Jeffrey C Gildersleeve.   

Abstract

Glycosylation is an important post-translational modification that influences many biological processes critical for development, normal physiologic function, and diseases. Unfortunately, progress toward understanding the roles of glycans in biology has been slow due to the challenges of studying glycans and the proteins that interact with them. Glycan microarrays provide a high-throughput approach for the rapid analysis of carbohydrate-macromolecule interactions. Protocols detailed here are intended to help laboratories with basic familiarity of DNA or protein microarrays to begin printing and performing assays using glycan microarrays. Basic and advanced data processing are also detailed, along with strategies for improving reproducibility of data collected with glycan arrays. Curr. Protoc. Chem Biol. 2:37-53.
© 2010 by John Wiley & Sons, Inc.

Entities:  

Keywords:  carbohydrate‐dependent binding; glycosylation; microarray; neoglycoconjugate; serum antibody profile

Year:  2010        PMID: 23836542      PMCID: PMC4533865          DOI: 10.1002/9780470559277.ch090228

Source DB:  PubMed          Journal:  Curr Protoc Chem Biol        ISSN: 2160-4762


  32 in total

1.  Transport at the air/water interface is the reason for rings in protein microarrays.

Authors:  Yang Deng; X-Y Zhu; Taryn Kienlen; Athena Guo
Journal:  J Am Chem Soc       Date:  2006-03-08       Impact factor: 15.419

2.  Novel anti-glycan antibodies related to inflammatory bowel disease diagnosis and phenotype.

Authors:  Cynthia H Seow; Joanne M Stempak; Wei Xu; Hui Lan; Anne M Griffiths; Gordon R Greenberg; A Hillary Steinhart; Nir Dotan; Mark S Silverberg
Journal:  Am J Gastroenterol       Date:  2009-04-21       Impact factor: 10.864

Review 3.  Carbohydrate microarrays: survey of fabrication techniques.

Authors:  Adrian S Culf; Miroslava Cuperlovic-Culf; Rodney J Ouellette
Journal:  OMICS       Date:  2006

4.  Printed covalent glycan array for ligand profiling of diverse glycan binding proteins.

Authors:  Ola Blixt; Steve Head; Tony Mondala; Christopher Scanlan; Margaret E Huflejt; Richard Alvarez; Marian C Bryan; Fabio Fazio; Daniel Calarese; James Stevens; Nahid Razi; David J Stevens; John J Skehel; Irma van Die; Dennis R Burton; Ian A Wilson; Richard Cummings; Nicolai Bovin; Chi-Huey Wong; James C Paulson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-24       Impact factor: 11.205

5.  Carbohydrate microarrays for the recognition of cross-reactive molecular markers of microbes and host cells.

Authors:  Denong Wang; Shaoyi Liu; Brian J Trummer; Chao Deng; Aili Wang
Journal:  Nat Biotechnol       Date:  2002-03       Impact factor: 54.908

6.  Novel fluorescent glycan microarray strategy reveals ligands for galectins.

Authors:  Xuezheng Song; Baoyun Xia; Sean R Stowell; Yi Lasanajak; David F Smith; Richard D Cummings
Journal:  Chem Biol       Date:  2009-01-30

7.  Sialoside analogue arrays for rapid identification of high affinity siglec ligands.

Authors:  Ola Blixt; Shoufa Han; Liang Liao; Ying Zeng; Julia Hoffmann; Satoshi Futakawa; James C Paulson
Journal:  J Am Chem Soc       Date:  2008-05-02       Impact factor: 15.419

8.  Microarrays with varying carbohydrate density reveal distinct subpopulations of serum antibodies.

Authors:  Oyindasola Oyelaran; Qian Li; David Farnsworth; Jeffrey C Gildersleeve
Journal:  J Proteome Res       Date:  2009-07       Impact factor: 4.466

9.  Neoglycolipid probes prepared via oxime ligation for microarray analysis of oligosaccharide-protein interactions.

Authors:  Yan Liu; Ten Feizi; María A Campanero-Rhodes; Robert A Childs; Yibing Zhang; Barbara Mulloy; Philip G Evans; Helen M I Osborn; Diana Otto; Paul R Crocker; Wengang Chai
Journal:  Chem Biol       Date:  2007-07

Review 10.  Glycan arrays: biological and medical applications.

Authors:  Pi-Hui Liang; Chung-Yi Wu; William A Greenberg; Chi-Huey Wong
Journal:  Curr Opin Chem Biol       Date:  2008-03-04       Impact factor: 8.822

View more
  27 in total

1.  Evaluation of riproximin binding properties reveals a novel mechanism for cellular targeting.

Authors:  Helene Bayer; Katharina Essig; Sven Stanzel; Martin Frank; Jeffrey C Gildersleeve; Martin R Berger; Cristina Voss
Journal:  J Biol Chem       Date:  2012-08-07       Impact factor: 5.157

2.  Diverse molecular recognition properties of blood group A binding monoclonal antibodies.

Authors:  Jeffrey C Gildersleeve; Whitney Shea Wright
Journal:  Glycobiology       Date:  2016-01-10       Impact factor: 4.313

3.  Structural analysis and unique molecular recognition properties of a Bauhinia forficata lectin that inhibits cancer cell growth.

Authors:  Jacek Lubkowski; Sarah V Durbin; Mariana C C Silva; David Farnsworth; Jeffrey C Gildersleeve; Maria Luiza V Oliva; Alexander Wlodawer
Journal:  FEBS J       Date:  2017-02-01       Impact factor: 5.542

4.  Serum glycan-binding IgG antibodies in HIV-1 infection and during the development of broadly neutralizing responses.

Authors:  Cathrine Scheepers; Sudipa Chowdhury; W Shea Wright; Christopher T Campbell; Nigel J Garrett; Quarraisha Abdool Karim; Salim S Abdool Karim; Penny L Moore; Jeffrey C Gildersleeve; Lynn Morris
Journal:  AIDS       Date:  2017-10-23       Impact factor: 4.177

5.  Whole-Cell Cancer Vaccines Induce Large Antibody Responses to Carbohydrates and Glycoproteins.

Authors:  Li Xia; David S Schrump; Jeffrey C Gildersleeve
Journal:  Cell Chem Biol       Date:  2016-11-23       Impact factor: 8.116

6.  Therapeutic Antibodies to Ganglioside GD2 Evolved from Highly Selective Germline Antibodies.

Authors:  Eric Sterner; Megan L Peach; Marc C Nicklaus; Jeffrey C Gildersleeve
Journal:  Cell Rep       Date:  2017-08-15       Impact factor: 9.423

7.  Sugar-binding proteins from fish: selection of high affinity "lambodies" that recognize biomedically relevant glycans.

Authors:  Xia Hong; Mark Z Ma; Jeffrey C Gildersleeve; Sudipa Chowdhury; Joseph J Barchi; Roy A Mariuzza; Michael B Murphy; Li Mao; Zeev Pancer
Journal:  ACS Chem Biol       Date:  2012-10-08       Impact factor: 5.100

8.  Glycan array analysis of the antigen repertoire targeted by tumor-binding antibodies.

Authors:  Jeffrey C Gildersleeve; Baomei Wang; Samuel Achilefu; Zhude Tu; Mai Xu
Journal:  Bioorg Med Chem Lett       Date:  2012-09-24       Impact factor: 2.823

9.  Enterotoxigenic Escherichia coli-blood group A interactions intensify diarrheal severity.

Authors:  Pardeep Kumar; F Matthew Kuhlmann; Subhra Chakraborty; A Louis Bourgeois; Jennifer Foulke-Abel; Brunda Tumala; Tim J Vickers; David A Sack; Barbara DeNearing; Clayton D Harro; W Shea Wright; Jeffrey C Gildersleeve; Matthew A Ciorba; Srikanth Santhanam; Chad K Porter; Ramiro L Gutierrez; Michael G Prouty; Mark S Riddle; Alexander Polino; Alaullah Sheikh; Mark Donowitz; James M Fleckenstein
Journal:  J Clin Invest       Date:  2018-06-25       Impact factor: 14.808

10.  Serum antibodies to blood group A predict survival on PROSTVAC-VF.

Authors:  Christopher T Campbell; James L Gulley; Oyindasola Oyelaran; James W Hodge; Jeffrey Schlom; Jeffrey C Gildersleeve
Journal:  Clin Cancer Res       Date:  2013-01-29       Impact factor: 12.531

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.