Literature DB >> 23832201

Conformational stability and crystal packing: polymorphism in Neurospora crassa CAT-3.

Andrés Zárate-Romero1, Vivian Stojanoff, Sonia Patricia Rojas-Trejo, Wilhelm Hansberg, Enrique Rudiño-Piñera.   

Abstract

Polymorphism is frequently observed from different crystallization conditions. In proteins, the effect on conformational variability is poorly documented, with only a few reported examples. Here, three polymorphic crystal structures determined for a large-subunit catalase, CAT-3 from Neurospora crassa, are reported. Two of them belonged to new space groups, P1 and P43212, and a third structure belonged to the same space group, P212121, as the previously deposited 2.3 Å resolution structure (PDB entry 3ej6), but had a higher resolution (1.95 Å). Comparisons between these polymorphic structures highlight the conformational stability of tetrameric CAT-3 and reveal a distortion in the tetrameric structure that has not previously been described.

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Year:  2013        PMID: 23832201      PMCID: PMC3702318          DOI: 10.1107/S1744309113013468

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  27 in total

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3.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

4.  Unusual Cys-Tyr covalent bond in a large catalase.

Authors:  Adelaida Díaz; Eduardo Horjales; Enrique Rudiño-Piñera; Rodrigo Arreola; Wilhelm Hansberg
Journal:  J Mol Biol       Date:  2004-09-17       Impact factor: 5.469

5.  Structure of the Clade 1 catalase, CatF of Pseudomonas syringae, at 1.8 A resolution.

Authors:  Xavi Carpena; Manuel Soriano; Martin G Klotz; Harry W Duckworth; Lynda J Donald; William Melik-Adamyan; Ignacio Fita; Peter C Loewen
Journal:  Proteins       Date:  2003-02-15

6.  Structure-function relationships in fungal large-subunit catalases.

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Journal:  J Mol Biol       Date:  2008-12-14       Impact factor: 5.469

Review 7.  Scaling and assessment of data quality.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

8.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

9.  Fitting molecular fragments into electron density.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  1 in total

1.  Integrative Activity of Mating Loci, Environmentally Responsive Genes, and Secondary Metabolism Pathways during Sexual Development of Chaetomium globosum.

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Journal:  mBio       Date:  2019-12-10       Impact factor: 7.867

  1 in total

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