Literature DB >> 23822229

Identification of two-step chemical mechanisms and determination of thermokinetic parameters using frequency responses to small temperature oscillations.

F Closa1, C Gosse, L Jullien, A Lemarchand.   

Abstract

Increased focus on kinetic signatures in biology, coupled with the lack of simple tools for chemical dynamics characterization, lead us to develop an efficient method for mechanism identification. A small thermal modulation is used to reveal chemical dynamics, which makes the technique compatible with in cellulo imaging. Then, the detection of concentration oscillations in an appropriate frequency range followed by a judicious analytical treatment of the data is sufficient to determine the number of chemical characteristic times, the reaction mechanism, and the full set of associated rate constants and enthalpies of reaction. To illustrate the scope of the method, dimeric protein folding is chosen as a biologically relevant example of nonlinear mechanism with one or two characteristic times.

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Year:  2013        PMID: 23822229     DOI: 10.1063/1.4811288

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  3 in total

1.  Periodic and stochastic thermal modulation of protein folding kinetics.

Authors:  Max Platkov; Martin Gruebele
Journal:  J Chem Phys       Date:  2014-07-21       Impact factor: 3.488

2.  Environmental Fluctuations and Stochastic Resonance in Protein Folding.

Authors:  Kapil Dave; Aram Davtyan; Garegin A Papoian; Martin Gruebele; Max Platkov
Journal:  Chemphyschem       Date:  2016-01-20       Impact factor: 3.102

3.  Expanding discriminative dimensions for analysis and imaging.

Authors:  Jérôme Querard; Arnaud Gautier; Thomas Le Saux; Ludovic Jullien
Journal:  Chem Sci       Date:  2015-03-18       Impact factor: 9.825

  3 in total

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