Literature DB >> 23820587

Alzheimer's disease and Parkinson's disease genome-wide association study top hits and risk of Parkinson's disease in Korean population.

Sun Ju Chung1, Yusun Jung, Myunghee Hong, Mi Jung Kim, Sooyeoun You, Young Jin Kim, Juyeon Kim, Kyuyoung Song.   

Abstract

Alzheimer's disease (AD) and Parkinson's disease (PD) have overlapping clinical and pathological features, suggesting a common pathway for these 2 neurodegenerative disorders. Here we investigated the association of both AD and PD GWAS top hits with PD susceptibility. We selected 25 single nucleotide polymorphisms (SNPs) in 9 genes (ABCA7, APOE, BST1, CLU, CR1, LRRK2, PARK16, PICALM, and SNCA) that were genotyped in 1036 PD case patients and 1208 controls. Case patients and controls were all ethnic Koreans. Logistic regression analysis was performed to calculate age- and sex-adjusted odds ratios. None of the AD-susceptibility loci (ABCA7, APOE, CLU, CR1, and PICALM) showed statistically significant association with PD susceptibility. In contrast, we replicated associations of SNCA, LRRK2, BST1, and PARK16 with PD susceptibility in Koreans. Of those, the SNCA SNP rs11931074 showed the most significant association with PD susceptibility (adjusted odds ratio = 1.48; 95% confidence interval = 1.31-1.67; p = 2.20E-10). In a logistic regression analysis with SNPs coded under an additive model, there was no significant genetic interaction between the LRRK2 and the PARK16 locus gene RAB7L1 in PD risk. Our results confirm the associations of SNCA, LRRK2, BST1, and PARK16 with PD susceptibility and fail to show significant associations of AD genome-wide association study (GWAS) top hits with PD susceptibility in a Korean population.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Alzheimer's disease; Genetic association; Parkinson's disease; SNCA; Single nucleotide polymorphism

Mesh:

Year:  2013        PMID: 23820587     DOI: 10.1016/j.neurobiolaging.2013.05.022

Source DB:  PubMed          Journal:  Neurobiol Aging        ISSN: 0197-4580            Impact factor:   4.673


  15 in total

1.  An updated analysis with 45,078 subjects confirms the association between SNCA rs11931074 and Parkinson's disease.

Authors:  Xu Liu; Ruixia Zhu; Tongling Xiao; Qu Li; Ying Zhu; Zhiyi He
Journal:  Neurol Sci       Date:  2018-08-17       Impact factor: 3.307

2.  Identifying the Association Between Alzheimer's Disease and Parkinson's Disease Using Genome-Wide Association Studies and Protein-Protein Interaction Network.

Authors:  Guiyou Liu; Xinjie Bao; Yongshuai Jiang; Mingzhi Liao; Qinghua Jiang; Rennan Feng; Liangcai Zhang; Guoda Ma; Zugen Chen; Guangyu Wang; Renzhi Wang; Bin Zhao; Keshen Li
Journal:  Mol Neurobiol       Date:  2014-11-05       Impact factor: 5.590

3.  SNCA rs11931074 polymorphism correlates with spontaneous brain activity and motor symptoms in Chinese patients with Parkinson's disease.

Authors:  Qian-Qian Si; Yong-Sheng Yuan; Yan Zhi; Min Wang; Jian-Wei Wang; Yu-Ting Shen; Li-Na Wang; Jun-Yi Li; Xi-Xi Wang; Ke-Zhong Zhang
Journal:  J Neural Transm (Vienna)       Date:  2019-06-26       Impact factor: 3.575

4.  rs3851179 Polymorphism at 5' to the PICALM Gene is Associated with Alzheimer and Parkinson Diseases in Brazilian Population.

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Journal:  Neuromolecular Med       Date:  2017-05-31       Impact factor: 3.843

5.  The analysis of association between SNCA, HUSEYO and CSMD1 gene variants and Parkinson's disease in Iranian population.

Authors:  Neda Shahmohammadibeni; Simin Rahimi-Aliabadi; Javad Jamshidi; Babak Emamalizadeh; Hossein Ali Shahmohammadibeni; Alireza Zare Bidoki; Haleh Akhavan-Niaki; Hajar Eftekhari; Shokoufeh Abdollahi; Mahmoud Shekari Khaniani; Mahnaz Shahmohammadibeni; Atena Fazeli; Marzieh Motallebi; Shaghayegh Taghavi; Azadeh Ahmadifard; Amir Ehtesham Shafiei Zarneh; Monavvar Andarva; Tahereh Dadkhah; Ehteram Khademi; Elham Alehabib; Mahnoosh Rahimi; Abbas Tafakhori; Minoo Atakhorrami; Hossein Darvish
Journal:  Neurol Sci       Date:  2016-01-05       Impact factor: 3.307

6.  Genetic Variants of SNCA Are Associated with Susceptibility to Parkinson's Disease but Not Amyotrophic Lateral Sclerosis or Multiple System Atrophy in a Chinese Population.

Authors:  YongPing Chen; Qian-Qian Wei; RuWei Ou; Bei Cao; XuePing Chen; Bi Zhao; XiaoYan Guo; Yuan Yang; Ke Chen; Ying Wu; Wei Song; Hui-Fang Shang
Journal:  PLoS One       Date:  2015-07-24       Impact factor: 3.240

7.  Anxiety- and depression-like behavior in mice lacking the CD157/BST1 gene, a risk factor for Parkinson's disease.

Authors:  Olga Lopatina; Toru Yoshihara; Tomoko Nishimura; Jing Zhong; Shirin Akther; Azam A K M Fakhrul; Mingkun Liang; Chiharu Higashida; Kohei Sumi; Kazumi Furuhara; Yuki Inahata; Jian-Jung Huang; Keita Koizumi; Shigeru Yokoyama; Takahiro Tsuji; Yulia Petugina; Andrei Sumarokov; Alla B Salmina; Koji Hashida; Yasuko Kitao; Osamu Hori; Masahide Asano; Yoji Kitamura; Takashi Kozaka; Kazuhiro Shiba; Fangfang Zhong; Min-Jue Xie; Makoto Sato; Katsuhiko Ishihara; Haruhiro Higashida
Journal:  Front Behav Neurosci       Date:  2014-04-22       Impact factor: 3.558

8.  Association of a BACE1 Gene Polymorphism with Parkinson's Disease in a Norwegian Population.

Authors:  Johannes Lange; Kristin Aaser Lunde; Camilla Sletten; Simon Geir Møller; Ole-Bjørn Tysnes; Guido Alves; Jan Petter Larsen; Jodi Maple-Grødem
Journal:  Parkinsons Dis       Date:  2015-12-14

9.  Diverse gene expression patterns in response to anticancer drugs between human and mouse cell lines revealed by a comparative transcriptomic analysis.

Authors:  Yong Guo; Zhuoran Liang; Xiaoliang Hou; Zhi Zhang
Journal:  Mol Med Rep       Date:  2017-08-04       Impact factor: 2.952

10.  Integrating network, sequence and functional features using machine learning approaches towards identification of novel Alzheimer genes.

Authors:  Salma Jamal; Sukriti Goyal; Asheesh Shanker; Abhinav Grover
Journal:  BMC Genomics       Date:  2016-10-18       Impact factor: 3.969

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