Literature DB >> 23812970

Resolving complex mixtures: trilinear diffusion data.

Johannes Björnerås1, Adolfo Botana, Gareth A Morris, Mathias Nilsson.   

Abstract

Complex mixtures are at the heart of biology, and biomacromolecules almost always exhibit their function in a mixture, e.g., the mode of action for a spider venom is typically dependent on a cocktail of compounds, not just the protein. Information about diseases is encoded in body fluids such as urine and plasma in the form of metabolite concentrations determined by the actions of enzymes. To understand better what is happening in real living systems we urgently need better methods to characterize such mixtures. In this paper we describe a potent way to disentangle the NMR spectra of mixture components, by exploiting data that vary independently in three or more dimensions, allowing the use of powerful algorithms to decompose the data to extract the information sought. The particular focus of this paper is on NMR diffusion data, which are typically bilinear but can be extended by a third dimension to give the desired data structure.

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Year:  2013        PMID: 23812970     DOI: 10.1007/s10858-013-9752-8

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  28 in total

1.  Analyzing and correcting spectrometer temperature sensitivity.

Authors:  P J Bowyer; A G Swanson; G A Morris
Journal:  J Magn Reson       Date:  2001-10       Impact factor: 2.229

2.  Enhanced diffusion-edited NMR spectroscopy of mixtures using chromatographic stationary phases.

Authors:  Stephane Viel; Fabio Ziarelli; Stefano Caldarelli
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-04       Impact factor: 11.205

3.  Matrix-assisted diffusion-ordered spectroscopy: mixture resolution by NMR using SDS micelles.

Authors:  Claudio F Tormena; Robert Evans; Stephan Haiber; Mathias Nilsson; Gareth A Morris
Journal:  Magn Reson Chem       Date:  2010-07       Impact factor: 2.447

4.  Flavonoid mixture analysis by matrix-assisted diffusion-ordered spectroscopy.

Authors:  Julia Cassani; Mathias Nilsson; Gareth A Morris
Journal:  J Nat Prod       Date:  2012-01-25       Impact factor: 4.050

5.  Speedy component resolution: an improved tool for processing diffusion-ordered spectroscopy data.

Authors:  Mathias Nilsson; Gareth A Morris
Journal:  Anal Chem       Date:  2008-04-12       Impact factor: 6.986

6.  Using perdeuterated surfactant micelles to resolve mixture components in diffusion-ordered NMR spectroscopy.

Authors:  Matthew E Zielinski; Kevin F Morris
Journal:  Magn Reson Chem       Date:  2009-01       Impact factor: 2.447

7.  On the inversion of diffusion NMR data: Tikhonov regularization and optimal choice of the regularization parameter.

Authors:  Iain J Day
Journal:  J Magn Reson       Date:  2011-05-31       Impact factor: 2.229

8.  Local covariance order diffusion-ordered spectroscopy: a powerful tool for mixture analysis.

Authors:  Adam A Colbourne; Gareth A Morris; Mathias Nilsson
Journal:  J Am Chem Soc       Date:  2011-04-29       Impact factor: 15.419

9.  Simultaneous enhancement of chemical shift dispersion and diffusion resolution in mixture analysis by diffusion-ordered NMR spectroscopy.

Authors:  Alexandria K Rogerson; Juan A Aguilar; Mathias Nilsson; Gareth A Morris
Journal:  Chem Commun (Camb)       Date:  2011-05-27       Impact factor: 6.222

10.  Matrix-assisted diffusion-ordered spectroscopy: application of surfactant solutions to the resolution of isomer spectra.

Authors:  Cláudio F Tormena; Robert Evans; Stephan Haiber; Mathias Nilsson; Gareth A Morris
Journal:  Magn Reson Chem       Date:  2012-05-01       Impact factor: 2.447

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  3 in total

1.  Revealing Well-Defined Soluble States during Amyloid Fibril Formation by Multilinear Analysis of NMR Diffusion Data.

Authors:  Kristine Steen Jensen; Sara Linse; Mathias Nilsson; Mikael Akke; Anders Malmendal
Journal:  J Am Chem Soc       Date:  2019-11-12       Impact factor: 15.419

2.  Structure-revealing data fusion.

Authors:  Evrim Acar; Evangelos E Papalexakis; Gözde Gürdeniz; Morten A Rasmussen; Anders J Lawaetz; Mathias Nilsson; Rasmus Bro
Journal:  BMC Bioinformatics       Date:  2014-07-12       Impact factor: 3.169

3.  The GNAT: A new tool for processing NMR data.

Authors:  Laura Castañar; Guilherme Dal Poggetto; Adam A Colbourne; Gareth A Morris; Mathias Nilsson
Journal:  Magn Reson Chem       Date:  2018-03-25       Impact factor: 2.447

  3 in total

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