Literature DB >> 23811137

Georgenia sediminis sp. nov., a moderately thermophilic actinobacterium isolated from sediment.

Zhi-Qing You1,2, Jie Li2, Sheng Qin3, Xin-Peng Tian2, Fa-Zuo Wang2, Si Zhang2.   

Abstract

A Gram-stain-positive actinobacterium, designated strain SCSIO 15020(T), was isolated from sediment of the South China Sea, and characterized by using a polyphasic approach. The temperature range for growth was 24-60 °C, with optimal growth occurring at 50 °C. The pH range for growth was 6-10 (optimum pH 8-9). The NaCl concentration range for growth was 0-5 % (w/v). The peptidoglycan type was A4α. Polar lipids contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannoside and an unknown polar lipid. The major menaquinone was MK-8(H4); MK-7(H4) was present as a minor component. The major fatty acids (>5 %) were anteiso-C15 : 0, iso-C15 : 0 and iso-C16 : 0. The DNA G+C content of strain SCSIO 15020(T) was 73.2 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain SCSIO 15020(T) belonged to the genus Georgenia, with the closest neighbours being Georgenia muralis 1A-C(T) (96.3 % similarity), Georgenia thermotolerans TT02-04(T) (95.7 %) and Georgenia ruanii YIM 004(T) (95.6 %). Based on evidence from the present polyphasic study, strain SCSIO 15020(T) is considered to represent a novel species of the genus Georgenia, for which the name Georgenia sediminis sp. nov. is proposed. The type strain is SCSIO 15020(T) ( = DSM 25884(T) = NBRC 108941(T)).

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Year:  2013        PMID: 23811137     DOI: 10.1099/ijs.0.051714-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Cytotoxic and antibacterial angucycline- and prodigiosin-analogues from the deep-sea derived Streptomyces sp. SCSIO 11594.

Authors:  Yongxiang Song; Guangfu Liu; Jie Li; Hongbo Huang; Xing Zhang; Hua Zhang; Jianhua Ju
Journal:  Mar Drugs       Date:  2015-03-16       Impact factor: 5.118

Review 2.  Thermophilic and alkaliphilic Actinobacteria: biology and potential applications.

Authors:  L Shivlata; Tulasi Satyanarayana
Journal:  Front Microbiol       Date:  2015-09-25       Impact factor: 5.640

3.  Genomic analysis of novel phytopathogenic Georgenia sp. strain SUB25.

Authors:  Pooja P Patel; Purvi M Rakhashiya; Vrinda S Thaker
Journal:  Genom Data       Date:  2015-07-09

4.  Structural and biochemical studies of a moderately thermophilic exonuclease I from Methylocaldum szegediense.

Authors:  Li Fei; SiSi Tian; Ruth Moysey; Mihaela Misca; John J Barker; Myron A Smith; Paul A McEwan; Ewa S Pilka; Lauren Crawley; Tom Evans; Dapeng Sun
Journal:  PLoS One       Date:  2015-02-06       Impact factor: 3.240

  4 in total

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