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Literature DB >> 23807191

NetGestalt: integrating multidimensional omics data over biological networks.

Zhiao Shi, Jing Wang, Bing Zhang.

Abstract

Entities: Disease Gene Species

Mesh：

Substances：
Proteome

Year: 2013 PMID： 23807191 PMCID： PMC3951100 DOI： 10.1038/nmeth.2517

Source DB: PubMed Journal: Nat Methods ISSN： 1548-7091 Impact factor: 28.547

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4 in total

1. The human genome browser at UCSC.

Authors: W James Kent; Charles W Sugnet; Terrence S Furey; Krishna M Roskin; Tom H Pringle; Alan M Zahler; David Haussler
Journal: Genome Res Date: 2002-06 Impact factor: 9.043

Review 2. Network biology: understanding the cell's functional organization.

Authors: Albert-László Barabási; Zoltán N Oltvai
Journal: Nat Rev Genet Date: 2004-02 Impact factor: 53.242

Review 3. Visualization of omics data for systems biology.

Authors: Nils Gehlenborg; Seán I O'Donoghue; Nitin S Baliga; Alexander Goesmann; Matthew A Hibbs; Hiroaki Kitano; Oliver Kohlbacher; Heiko Neuweger; Reinhard Schneider; Dan Tenenbaum; Anne-Claude Gavin
Journal: Nat Methods Date: 2010-03 Impact factor: 28.547

4. Comprehensive genomic characterization defines human glioblastoma genes and core pathways.

Authors:
Journal: Nature Date: 2008-09-04 Impact factor: 49.962

4 in total

26 in total

Review 1. Methods, Tools and Current Perspectives in Proteogenomics.

Authors: Kelly V Ruggles; Karsten Krug; Xiaojing Wang; Karl R Clauser; Jing Wang; Samuel H Payne; David Fenyö; Bing Zhang; D R Mani
Journal: Mol Cell Proteomics Date: 2017-04-29 Impact factor: 5.911

Review 2. The Expanding Landscape of the Thiol Redox Proteome.

Authors: Jing Yang; Kate S Carroll; Daniel C Liebler
Journal: Mol Cell Proteomics Date: 2015-10-30 Impact factor: 5.911

Review 3. The emergence of proteome-wide technologies: systematic analysis of proteins comes of age.

Authors: Michal Breker; Maya Schuldiner
Journal: Nat Rev Mol Cell Biol Date: 2014-06-18 Impact factor: 94.444

4. Network biology in medicine and beyond.

Authors: Bai Zhang; Ye Tian; Zhen Zhang
Journal: Circ Cardiovasc Genet Date: 2014-08

5. JUMPg: An Integrative Proteogenomics Pipeline Identifying Unannotated Proteins in Human Brain and Cancer Cells.

Authors: Yuxin Li; Xusheng Wang; Ji-Hoon Cho; Timothy I Shaw; Zhiping Wu; Bing Bai; Hong Wang; Suiping Zhou; Thomas G Beach; Gang Wu; Jinghui Zhang; Junmin Peng
Journal: J Proteome Res Date: 2016-06-13 Impact factor: 4.466

6. Proteogenomic characterization of human colon and rectal cancer.

Authors: Bing Zhang; Jing Wang; Xiaojing Wang; Jing Zhu; Qi Liu; Zhiao Shi; Matthew C Chambers; Lisa J Zimmerman; Kent F Shaddox; Sangtae Kim; Sherri R Davies; Sean Wang; Pei Wang; Christopher R Kinsinger; Robert C Rivers; Henry Rodriguez; R Reid Townsend; Matthew J C Ellis; Steven A Carr; David L Tabb; Robert J Coffey; Robbert J C Slebos; Daniel C Liebler
Journal: Nature Date: 2014-07-20 Impact factor: 49.962