Literature DB >> 23796575

Characterization of the first eukaryotic cold-adapted patatin-like phospholipase from the psychrophilic Euplotes focardii: Identification of putative determinants of thermal-adaptation by comparison with the homologous protein from the mesophilic Euplotes crassus.

Guang Yang1, Concetta De Santi, Donatella de Pascale, Sandra Pucciarelli, Stefania Pucciarelli, Cristina Miceli.   

Abstract

The ciliated protozoon Euplotes focardii, originally isolated from the coastal seawaters of Terra Nova Bay in Antarctica, shows a strictly psychrophilic phenotype, including optimal survival and multiplication rates at 4-5 °C. This characteristic makes E. focardii an ideal model species for identifying the molecular bases of cold adaptation in psychrophilic organisms, as well as a suitable source of novel cold-active enzymes for industrial applications. In the current study, we characterized the patatin-like phospholipase from E. focardii (EfPLP), and its enzymatic activity was compared to that of the homologous protein from the mesophilic congeneric species Euplotes crassus (EcPLP). Both EfPLP and EcPLP have consensus motifs conserved in other patatin-like phospholipases. By analyzing both esterase and phospholipase A2 activity, we determined the thermostability and the optimal pH, temperature dependence and substrates of these enzymes. We demonstrated that EfPLP shows the characteristics of a psychrophilic phospholipase. Furthermore, we analyzed the enzymatic activity of three engineered versions of the EfPLP, in which unique residues of EfPLP, Gly80, Ala201 and Val204, were substituted through site-directed mutagenesis with residues found in the E. crassus homolog (Glu, Pro and Ile, respectively). Additionally, three corresponding mutants of EcPLP were also generated and characterized. These analyses showed that the substitution of amino acids with rigid and bulky charged/hydrophobic side chain in the psychrophilic EfPLP confers enzymatic properties similar to those of the mesophilic patatin-like phospholipase, and vice versa. This is the first report on the isolation and characterization of a cold-adapted patatin-like phospholipase from eukaryotes. The results reported in this paper support the idea that enzyme thermal-adaptation is based mainly on some amino acid residues that influence the structural flexibility of polypeptides and that EfPLP is an attractive biocatalyst for industrial processes at low temperatures.
Copyright © 2013 Elsevier Masson SAS. All rights reserved.

Entities:  

Keywords:  1,2-dibutanoyl-sn-glycero-3-phosphocholine; 1,2-dihexanoyl-sn-glycero-3-phosphocholine; 1,2-dipropinoyl-sn-glycero-3-phosphocholine; DiC(3)PC; DiC(4)PC; DiC(6)PC; Molecular cold adaptation; PLP; Patatin-like phosholipase; Psychrophilic enzymes; RATE; Site-directed mutagenesis; p-nitrophenyl; pNP; patatin-like phospholipase; rapid amplification of telomeric ends

Mesh:

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Year:  2013        PMID: 23796575     DOI: 10.1016/j.biochi.2013.06.008

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  8 in total

1.  Microbial Consortium Associated with the Antarctic Marine Ciliate Euplotes focardii: An Investigation from Genomic Sequences.

Authors:  Sandra Pucciarelli; Raghul Rajan Devaraj; Alessio Mancini; Patrizia Ballarini; Michele Castelli; Martina Schrallhammer; Giulio Petroni; Cristina Miceli
Journal:  Microb Ecol       Date:  2015-02-24       Impact factor: 4.552

2.  Rational Engineering of a Cold-Adapted α-Amylase from the Antarctic Ciliate Euplotes focardii for Simultaneous Improvement of Thermostability and Catalytic Activity.

Authors:  Guang Yang; Hua Yao; Matteo Mozzicafreddo; Patrizia Ballarini; Sandra Pucciarelli; Cristina Miceli
Journal:  Appl Environ Microbiol       Date:  2017-06-16       Impact factor: 4.792

3.  Horizontal gene transfer and silver nanoparticles production in a new Marinomonas strain isolated from the Antarctic psychrophilic ciliate Euplotes focardii.

Authors:  Maria Sindhura John; Joseph Amruthraj Nagoth; Kesava Priyan Ramasamy; Patrizia Ballarini; Matteo Mozzicafreddo; Alessio Mancini; Andrea Telatin; Pietro Liò; Gabriele Giuli; Antonino Natalello; Cristina Miceli; Sandra Pucciarelli
Journal:  Sci Rep       Date:  2020-06-23       Impact factor: 4.379

4.  An In-Silico Comparative Study of Lipases from the Antarctic Psychrophilic Ciliate Euplotes focardii and the Mesophilic Congeneric Species Euplotes crassus: Insight into Molecular Cold-Adaptation.

Authors:  Guang Yang; Matteo Mozzicafreddo; Patrizia Ballarini; Sandra Pucciarelli; Cristina Miceli
Journal:  Mar Drugs       Date:  2021-01-27       Impact factor: 5.118

5.  The macronuclear genome of the Antarctic psychrophilic marine ciliate Euplotes focardii reveals new insights on molecular cold adaptation.

Authors:  Matteo Mozzicafreddo; Sandra Pucciarelli; Estienne C Swart; Angela Piersanti; Christiane Emmerich; Giovanna Migliorelli; Patrizia Ballarini; Cristina Miceli
Journal:  Sci Rep       Date:  2021-09-21       Impact factor: 4.379

6.  Proteomic Analysis of the Inflorescence Stem Mechanical Strength Difference in Herbaceous Peonies (Paeonia lactiflora Pall.).

Authors:  Yan Sun; Ruomin Li; Huanxin Zhang; Jingjing Ye; Chengzhong Li
Journal:  ACS Omega       Date:  2022-09-26

7.  Synthesis of Bioactive Silver Nanoparticles Using New Bacterial Strains from an Antarctic Consortium.

Authors:  Maria Sindhura John; Joseph Amruthraj Nagoth; Kesava Priyan Ramasamy; Alessio Mancini; Gabriele Giuli; Cristina Miceli; Sandra Pucciarelli
Journal:  Mar Drugs       Date:  2022-08-31       Impact factor: 6.085

8.  Antarctic marine ciliates under stress: superoxide dismutases from the psychrophilic Euplotes focardii are cold-active yet heat tolerant enzymes.

Authors:  Alessandro Pischedda; Kesava Priyan Ramasamy; Marco Mangiagalli; Federica Chiappori; Luciano Milanesi; Cristina Miceli; Sandra Pucciarelli; Marina Lotti
Journal:  Sci Rep       Date:  2018-10-03       Impact factor: 4.379

  8 in total

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