Literature DB >> 23795834

Complete mitochondrial genome organization of Tor putitora.

Jyoti Sati1, Chirag Goel, Rohit Kumar, S Ali, R S Patiyal, Vijoy Kumar Singh, Prabhati Kumari Sahoo, Ashoktaru Barat.   

Abstract

The complete mitochondrial genome of Tor putitora, an endemic coldwater fish of Himalayas was determined for the first time. The genome is 16,576 bp in length and consists of 13 protein coding genes, 22 tRNAs, 2 rRNA genes and 1 putative control region. The gene organization and its order were similar to other vertebrates. The overall base composition was; A: 31.9%, G: 15.6%, C: 27.5%, T: 25%, A + T content 56.9% and the G + C content 43.1%. The control region was also consisted of a microsatellite locus (TA) 13 between 16,456 to 16,481 bp. The present study will provide the rationale for the management and conservation of T. putitora.

Entities:  

Keywords:  Control region; Golden Mahseer; endangered

Mesh:

Substances:

Year:  2013        PMID: 23795834     DOI: 10.3109/19401736.2013.800505

Source DB:  PubMed          Journal:  Mitochondrial DNA        ISSN: 1940-1736


  3 in total

1.  Complete mitochondrial genome of threatened mahseer Tor tor (Hamilton 1822) and its phylogenetic relationship within Cyprinidae family.

Authors:  A Pavan-Kumar; Sudhanshu Raman; Prakash G Koringa; Namrata Patel; Tejas Shah; Rajeev K Singh; Gopal Krishna; C G Joshi; P Gireesh-Babu; Aparna Chaudhari
Journal:  J Genet       Date:  2016-12       Impact factor: 1.166

2.  The first de novo genome assembly and sex marker identification of Pluang Chomphu fish (Tor tambra) from Southern Thailand.

Authors:  Komwit Surachat; Panchalika Deachamag; Monwadee Wonglapsuwan
Journal:  Comput Struct Biotechnol J       Date:  2022-03-23       Impact factor: 7.271

3.  De novo assembly and characterization of tissue-specific transcriptome in the endangered golden mahseer, Tor putitora.

Authors:  Ashoktaru Barat; Rohit Kumar; Chirag Goel; Atul Kumar Singh; Prabhati Kumari Sahoo
Journal:  Meta Gene       Date:  2015-11-11
  3 in total

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