Literature DB >> 23795133

Rupatadine.

Manpreet Kaur1, Jerry P Jasinski, Zane A Luopa, Neeraj Kumar, Nilesh G Patel, Omprakash Gudaparthi, H S Yathirajan.   

Abstract

IN THE TITLE COMPOUND (SYSTEMATIC NAME: 8-chloro-11-{1-[(5-methyl-pyridin-3-yl)meth-yl]piperidin-4-yl-idene}-6,11-di-hydro-5H-benzo[5,6]cyclo-hepta-[1,2-b]pyridine), C26H26ClN3, the dihedral angle between the mean planes of the chloro-phenyl and cyclo-hepta-[1,2-b]pyridinyl rings fused to the cyclo-heptane ring is 56.6 (1)°. The mean planes of the cyclo-hepta-[1,2-b]pyridinyl and 5-methyl-pyridin-3-yl rings are twisted by 64.9 (4)°. The central piperizene group is in a slightly distorted chair configuration. A weak intra-molecular C-H⋯N inter-action is observed between the cyclo-hepta-[1,2-b]pyridinyl and piperidin-4-yl-idene moieties.

Entities:  

Year:  2013        PMID: 23795133      PMCID: PMC3685114          DOI: 10.1107/S1600536813014256

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological importance of rupatadine, see: Kean & Plosker (2007 ▶); Merlos et al. (1997 ▶); Mullol et al. (2008 ▶); Picado (2006 ▶). For the reported synthesis methodology of rupatadine, see: Agarwal et al. (2008 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C26H26ClN3 M = 415.95 Monoclinic, a = 10.2655 (3) Å b = 11.3341 (4) Å c = 18.8111 (6) Å β = 90.874 (3)° V = 2188.43 (11) Å3 Z = 4 Cu Kα radiation μ = 1.67 mm−1 T = 173 K 0.42 × 0.38 × 0.22 mm

Data collection

Agilent Xcalibur (Eos, Gemini) diffractometer Absorption correction: multi-scan (CrysAlis PRO and CrysAlis RED; Agilent, 2012 ▶) T min = 0.673, T max = 1.000 13849 measured reflections 4281 independent reflections 3565 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.122 S = 1.05 4281 reflections 273 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.29 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis RED (Agilent, 2012 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2012 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813014256/hg5317sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813014256/hg5317Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813014256/hg5317Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H26ClN3F(000) = 880
Mr = 415.95Dx = 1.262 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.5418 Å
a = 10.2655 (3) ÅCell parameters from 4864 reflections
b = 11.3341 (4) Åθ = 3.9–72.2°
c = 18.8111 (6) ŵ = 1.67 mm1
β = 90.874 (3)°T = 173 K
V = 2188.43 (11) Å3Irregular, clear orangish orange
Z = 40.42 × 0.38 × 0.22 mm
Agilent Xcalibur (Eos, Gemini) diffractometer4281 independent reflections
Radiation source: Enhance (Cu) X-ray Source3565 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
Detector resolution: 16.0416 pixels mm-1θmax = 72.4°, θmin = 4.6°
ω scansh = −11→12
Absorption correction: multi-scan (CrysAlis PRO and CrysAlis RED; Agilent, 2012)k = −8→13
Tmin = 0.673, Tmax = 1.000l = −21→23
13849 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.041w = 1/[σ2(Fo2) + (0.0616P)2 + 0.3876P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.122(Δ/σ)max < 0.001
S = 1.05Δρmax = 0.22 e Å3
4281 reflectionsΔρmin = −0.29 e Å3
273 parametersExtinction correction: SHELXL2012 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.0043 (3)
Primary atom site location: structure-invariant direct methods
Experimental. (HPLC purity 99.75 %) FT IR (KBr) : 1350.2, 1475.6, 1583.6; 1H NMR (300 MHz, DMSO d6) δ 2.072 (s, 1H), 2.127-2.164 (m, 3H), 2.247 (s, 3H), 2.264-2.320 (m, 2H), 2.545-2.580 (m, 2H), 2.725-2.827 (m, 2H), 3.217-3.324 (m, 2H), 3.406 (s, 2H), 7.011-7.038 (d, 1H), 7.124-7.193 (m, 2H), 7.242-7.248 (d, 1H), 7.474-7.537 (m, 2H), 8.250-8.313 (dd, 3H); MS m/z (EI): 416 (M + 1).
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Cl10.21448 (5)0.23499 (6)0.09566 (3)0.0826 (2)
N10.76596 (13)0.40249 (13)0.35326 (7)0.0484 (3)
N20.98891 (11)0.58991 (11)0.10639 (6)0.0391 (3)
N31.29611 (17)0.88557 (15)0.14524 (10)0.0684 (5)
C10.69993 (14)0.44001 (13)0.23053 (7)0.0386 (3)
C20.69596 (14)0.46981 (14)0.30801 (8)0.0399 (3)
C30.61966 (15)0.56496 (14)0.32955 (8)0.0443 (4)
C40.54486 (17)0.63427 (15)0.27422 (9)0.0509 (4)
H4A0.60380.65500.23500.061*
H4B0.51370.70870.29560.061*
C50.42840 (16)0.56586 (15)0.24409 (9)0.0487 (4)
H5A0.36930.54880.28390.058*
H5B0.38080.61870.21080.058*
C60.45366 (15)0.45093 (14)0.20564 (8)0.0425 (3)
C70.57478 (14)0.39337 (14)0.19947 (7)0.0394 (3)
C80.76056 (19)0.43009 (18)0.42245 (9)0.0576 (5)
H80.81010.38380.45520.069*
C90.6876 (2)0.52139 (19)0.44884 (9)0.0626 (5)
H90.68630.53730.49840.075*
C100.61619 (18)0.58930 (16)0.40146 (9)0.0558 (4)
H100.56470.65280.41830.067*
C110.34414 (16)0.39908 (17)0.17349 (9)0.0519 (4)
H110.26200.43710.17670.062*
C120.35305 (16)0.29398 (17)0.13731 (9)0.0531 (4)
C130.46934 (18)0.23397 (16)0.13272 (9)0.0525 (4)
H130.47440.16040.10870.063*
C140.57883 (16)0.28467 (15)0.16437 (8)0.0456 (4)
H140.65960.24400.16210.055*
C150.80824 (14)0.45528 (14)0.19264 (8)0.0401 (3)
C160.81702 (16)0.43718 (15)0.11334 (8)0.0468 (4)
H16A0.73020.41540.09380.056*
H16B0.87780.37160.10350.056*
C170.86446 (14)0.54878 (15)0.07714 (8)0.0446 (4)
H17A0.87380.53330.02570.053*
H17B0.79840.61160.08260.053*
C180.97594 (15)0.61314 (15)0.18277 (8)0.0445 (4)
H18A0.91080.67640.18970.053*
H18B1.06040.64120.20240.053*
C190.93417 (14)0.50352 (15)0.22298 (8)0.0440 (4)
H19A1.00300.44260.21990.053*
H19B0.92270.52330.27380.053*
C201.02633 (15)0.69742 (15)0.06862 (8)0.0462 (4)
H20A0.96310.76060.07950.055*
H20B1.02150.68230.01680.055*
C211.16119 (15)0.73962 (13)0.08791 (8)0.0412 (3)
C221.17979 (18)0.84145 (16)0.12707 (10)0.0566 (4)
H221.10460.88290.14210.068*
C231.39933 (18)0.82602 (18)0.12289 (10)0.0604 (5)
H231.48310.85630.13500.072*
C241.39372 (16)0.72266 (16)0.08313 (9)0.0485 (4)
C251.27098 (15)0.67932 (15)0.06625 (8)0.0432 (3)
H251.26210.60830.03980.052*
C261.51532 (18)0.6591 (2)0.06151 (12)0.0698 (6)
H26A1.50560.57450.07090.105*
H26B1.58990.68970.08890.105*
H26C1.52970.67150.01070.105*
U11U22U33U12U13U23
Cl10.0574 (3)0.1179 (5)0.0722 (3)−0.0312 (3)−0.0097 (2)−0.0091 (3)
N10.0462 (7)0.0604 (8)0.0386 (7)0.0055 (6)0.0025 (5)0.0016 (6)
N20.0342 (6)0.0489 (7)0.0344 (6)−0.0019 (5)0.0044 (5)−0.0008 (5)
N30.0712 (11)0.0625 (10)0.0716 (11)−0.0165 (8)0.0050 (8)−0.0175 (8)
C10.0391 (7)0.0420 (8)0.0349 (7)−0.0004 (6)0.0034 (6)0.0015 (6)
C20.0383 (7)0.0460 (8)0.0356 (7)−0.0052 (6)0.0056 (6)0.0020 (6)
C30.0457 (8)0.0445 (8)0.0430 (8)−0.0044 (7)0.0067 (6)−0.0008 (7)
C40.0605 (10)0.0402 (8)0.0523 (9)0.0026 (7)0.0079 (7)0.0035 (7)
C50.0476 (9)0.0516 (9)0.0469 (9)0.0087 (7)0.0051 (7)0.0107 (7)
C60.0408 (8)0.0505 (9)0.0364 (7)−0.0010 (6)0.0049 (6)0.0099 (6)
C70.0396 (7)0.0459 (8)0.0330 (7)−0.0040 (6)0.0050 (6)0.0063 (6)
C80.0623 (11)0.0736 (12)0.0367 (8)0.0052 (9)−0.0012 (7)0.0043 (8)
C90.0730 (12)0.0789 (13)0.0362 (8)0.0016 (10)0.0048 (8)−0.0107 (8)
C100.0629 (11)0.0555 (10)0.0493 (9)0.0025 (8)0.0084 (8)−0.0122 (8)
C110.0392 (8)0.0706 (11)0.0459 (9)−0.0030 (7)0.0033 (7)0.0087 (8)
C120.0449 (9)0.0717 (12)0.0427 (8)−0.0173 (8)−0.0017 (7)0.0056 (8)
C130.0598 (10)0.0542 (10)0.0435 (9)−0.0123 (8)0.0018 (7)−0.0012 (7)
C140.0449 (8)0.0495 (9)0.0426 (8)−0.0014 (7)0.0037 (6)0.0019 (7)
C150.0386 (7)0.0457 (8)0.0360 (7)−0.0022 (6)0.0034 (6)−0.0008 (6)
C160.0451 (8)0.0584 (10)0.0370 (8)−0.0105 (7)0.0075 (6)−0.0078 (7)
C170.0387 (8)0.0608 (10)0.0343 (7)−0.0050 (7)0.0030 (6)−0.0020 (7)
C180.0418 (8)0.0552 (9)0.0364 (7)−0.0072 (7)0.0024 (6)−0.0051 (7)
C190.0394 (8)0.0564 (9)0.0364 (7)−0.0036 (7)0.0023 (6)0.0012 (7)
C200.0411 (8)0.0540 (9)0.0436 (8)−0.0003 (7)0.0021 (6)0.0062 (7)
C210.0443 (8)0.0447 (8)0.0348 (7)−0.0038 (6)0.0048 (6)0.0052 (6)
C220.0586 (10)0.0550 (10)0.0563 (10)−0.0035 (8)0.0110 (8)−0.0088 (8)
C230.0531 (10)0.0690 (12)0.0589 (10)−0.0227 (9)−0.0024 (8)0.0007 (9)
C240.0437 (8)0.0598 (10)0.0420 (8)−0.0050 (7)0.0037 (6)0.0096 (7)
C250.0470 (8)0.0472 (8)0.0356 (7)−0.0027 (7)0.0021 (6)0.0007 (6)
C260.0456 (10)0.0882 (15)0.0758 (13)0.0045 (10)0.0078 (9)0.0121 (11)
Cl1—C121.7465 (17)C12—C131.378 (3)
N1—C21.343 (2)C13—H130.9500
N1—C81.340 (2)C13—C141.388 (2)
N2—C171.4597 (18)C14—H140.9500
N2—C181.4688 (18)C15—C161.510 (2)
N2—C201.465 (2)C15—C191.508 (2)
N3—C221.334 (2)C16—H16A0.9900
N3—C231.330 (3)C16—H16B0.9900
C1—C21.4973 (19)C16—C171.520 (2)
C1—C71.499 (2)C17—H17A0.9900
C1—C151.341 (2)C17—H17B0.9900
C2—C31.397 (2)C18—H18A0.9900
C3—C41.505 (2)C18—H18B0.9900
C3—C101.382 (2)C18—C191.520 (2)
C4—H4A0.9900C19—H19A0.9900
C4—H4B0.9900C19—H19B0.9900
C4—C51.527 (2)C20—H20A0.9900
C5—H5A0.9900C20—H20B0.9900
C5—H5B0.9900C20—C211.504 (2)
C5—C61.514 (2)C21—C221.381 (2)
C6—C71.411 (2)C21—C251.385 (2)
C6—C111.398 (2)C22—H220.9500
C7—C141.399 (2)C23—H230.9500
C8—H80.9500C23—C241.391 (3)
C8—C91.375 (3)C24—C251.385 (2)
C9—H90.9500C24—C261.503 (2)
C9—C101.380 (3)C25—H250.9500
C10—H100.9500C26—H26A0.9800
C11—H110.9500C26—H26B0.9800
C11—C121.376 (3)C26—H26C0.9800
C8—N1—C2116.94 (15)C1—C15—C19123.97 (13)
C17—N2—C18109.52 (11)C19—C15—C16111.07 (12)
C17—N2—C20108.51 (12)C15—C16—H16A109.5
C20—N2—C18110.72 (12)C15—C16—H16B109.5
C23—N3—C22116.29 (16)C15—C16—C17110.72 (13)
C2—C1—C7115.02 (12)H16A—C16—H16B108.1
C15—C1—C2121.55 (13)C17—C16—H16A109.5
C15—C1—C7123.42 (13)C17—C16—H16B109.5
N1—C2—C1117.81 (13)N2—C17—C16112.43 (13)
N1—C2—C3123.49 (14)N2—C17—H17A109.1
C3—C2—C1118.70 (14)N2—C17—H17B109.1
C2—C3—C4119.01 (14)C16—C17—H17A109.1
C10—C3—C2117.46 (15)C16—C17—H17B109.1
C10—C3—C4123.53 (15)H17A—C17—H17B107.9
C3—C4—H4A109.1N2—C18—H18A109.3
C3—C4—H4B109.1N2—C18—H18B109.3
C3—C4—C5112.33 (13)N2—C18—C19111.77 (13)
H4A—C4—H4B107.9H18A—C18—H18B107.9
C5—C4—H4A109.1C19—C18—H18A109.3
C5—C4—H4B109.1C19—C18—H18B109.3
C4—C5—H5A107.7C15—C19—C18110.78 (13)
C4—C5—H5B107.7C15—C19—H19A109.5
H5A—C5—H5B107.1C15—C19—H19B109.5
C6—C5—C4118.39 (13)C18—C19—H19A109.5
C6—C5—H5A107.7C18—C19—H19B109.5
C6—C5—H5B107.7H19A—C19—H19B108.1
C7—C6—C5126.49 (14)N2—C20—H20A108.9
C11—C6—C5115.21 (14)N2—C20—H20B108.9
C11—C6—C7118.30 (15)N2—C20—C21113.25 (12)
C6—C7—C1123.78 (14)H20A—C20—H20B107.7
C14—C7—C1117.58 (13)C21—C20—H20A108.9
C14—C7—C6118.61 (14)C21—C20—H20B108.9
N1—C8—H8118.1C22—C21—C20120.91 (15)
N1—C8—C9123.86 (17)C22—C21—C25117.57 (15)
C9—C8—H8118.1C25—C21—C20121.50 (14)
C8—C9—H9120.9N3—C22—C21124.46 (17)
C8—C9—C10118.27 (16)N3—C22—H22117.8
C10—C9—H9120.9C21—C22—H22117.8
C3—C10—H10120.0N3—C23—H23117.6
C9—C10—C3119.98 (17)N3—C23—C24124.82 (16)
C9—C10—H10120.0C24—C23—H23117.6
C6—C11—H11119.4C23—C24—C26121.46 (17)
C12—C11—C6121.26 (16)C25—C24—C23116.89 (16)
C12—C11—H11119.4C25—C24—C26121.63 (17)
C11—C12—Cl1119.57 (14)C21—C25—C24119.96 (15)
C11—C12—C13121.51 (15)C21—C25—H25120.0
C13—C12—Cl1118.91 (15)C24—C25—H25120.0
C12—C13—H13121.1C24—C26—H26A109.5
C12—C13—C14117.74 (17)C24—C26—H26B109.5
C14—C13—H13121.1C24—C26—H26C109.5
C7—C14—H14118.8H26A—C26—H26B109.5
C13—C14—C7122.50 (16)H26A—C26—H26C109.5
C13—C14—H14118.8H26B—C26—H26C109.5
C1—C15—C16124.75 (14)
Cl1—C12—C13—C14177.98 (13)C7—C1—C15—C165.0 (2)
N1—C2—C3—C4−179.86 (14)C7—C1—C15—C19179.20 (14)
N1—C2—C3—C10−0.6 (2)C7—C6—C11—C120.7 (2)
N1—C8—C9—C10−0.4 (3)C8—N1—C2—C1−179.61 (14)
N2—C18—C19—C15−56.69 (17)C8—N1—C2—C30.0 (2)
N2—C20—C21—C22−109.94 (17)C8—C9—C10—C3−0.2 (3)
N2—C20—C21—C2571.12 (18)C10—C3—C4—C5−106.83 (19)
N3—C23—C24—C25−0.3 (3)C11—C6—C7—C1179.20 (13)
N3—C23—C24—C26−178.44 (19)C11—C6—C7—C14−2.9 (2)
C1—C2—C3—C4−0.3 (2)C11—C12—C13—C14−1.7 (3)
C1—C2—C3—C10179.00 (14)C12—C13—C14—C7−0.6 (2)
C1—C7—C14—C13−179.02 (14)C15—C1—C2—N1−68.7 (2)
C1—C15—C16—C17122.92 (17)C15—C1—C2—C3111.71 (17)
C1—C15—C19—C18−122.30 (16)C15—C1—C7—C6−126.93 (17)
C2—N1—C8—C90.5 (3)C15—C1—C7—C1455.1 (2)
C2—C1—C7—C652.68 (19)C15—C16—C17—N255.82 (17)
C2—C1—C7—C14−125.27 (15)C16—C15—C19—C1852.61 (17)
C2—C1—C15—C16−174.60 (14)C17—N2—C18—C1959.11 (16)
C2—C1—C15—C19−0.4 (2)C17—N2—C20—C21−172.79 (13)
C2—C3—C4—C572.40 (19)C18—N2—C17—C16−58.83 (17)
C2—C3—C10—C90.7 (3)C18—N2—C20—C2166.99 (16)
C3—C4—C5—C6−61.48 (19)C19—C15—C16—C17−51.94 (18)
C4—C3—C10—C9179.93 (17)C20—N2—C17—C16−179.79 (13)
C4—C5—C6—C75.9 (2)C20—N2—C18—C19178.72 (12)
C4—C5—C6—C11−173.99 (14)C20—C21—C22—N3−178.84 (17)
C5—C6—C7—C1−0.7 (2)C20—C21—C25—C24178.02 (14)
C5—C6—C7—C14177.28 (14)C22—N3—C23—C24−0.5 (3)
C5—C6—C11—C12−179.44 (14)C22—C21—C25—C24−1.0 (2)
C6—C7—C14—C132.9 (2)C23—N3—C22—C210.6 (3)
C6—C11—C12—Cl1−178.00 (12)C23—C24—C25—C211.0 (2)
C6—C11—C12—C131.6 (3)C25—C21—C22—N30.1 (3)
C7—C1—C2—N1111.69 (16)C26—C24—C25—C21179.15 (15)
C7—C1—C2—C3−67.92 (18)
D—H···AD—HH···AD···AD—H···A
C19—H19B···N10.992.603.229 (2)121
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C19—H19B⋯N10.992.603.229 (2)121
  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Rupatadine: pharmacological profile and its use in the treatment of allergic disorders.

Authors:  César Picado
Journal:  Expert Opin Pharmacother       Date:  2006-10       Impact factor: 3.889

3.  Rupatadine, a new potent, orally active dual antagonist of histamine and platelet-activating factor (PAF).

Authors:  M Merlos; M Giral; D Balsa; R Ferrando; M Queralt; A Puigdemont; J García-Rafanell; J Forn
Journal:  J Pharmacol Exp Ther       Date:  1997-01       Impact factor: 4.030

Review 4.  Rupatadine: a review of its use in the management of allergic disorders.

Authors:  Susan J Keam; Greg L Plosker
Journal:  Drugs       Date:  2007       Impact factor: 9.546

Review 5.  Rupatadine in allergic rhinitis and chronic urticaria.

Authors:  J Mullol; J Bousquet; C Bachert; W G Canonica; A Gimenez-Arnau; M L Kowalski; E Martí-Guadaño; M Maurer; C Picado; G Scadding; P Van Cauwenberge
Journal:  Allergy       Date:  2008-04       Impact factor: 13.146

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.