Literature DB >> 23795092

3-Benzoyl-1-[4-(methyl-sulfan-yl)phen-yl]thio-urea.

Rosane de P Castro1, Fernando C Macedo, Tiago O Brito, Angelo de Fátima, José R Sabino.   

Abstract

The title compound, C15H14N2OS2, adopts a helix conformation. An intra-molecular N-H⋯O hydrogen bond leads to a six-membered pseudo-ring [r.m.s. deviation = 0.0212 Å, maximum deviation = 0.033 (1) Å for the N atom bearing the benzoyl group] in the central unit. The benzene and (methyl-sulfan-yl)benzene ring [r.m.s = 0.0028 Å and largest deviation of 0.067 (3) Å for the methyl-sulfanyl C atom] make dihedral angles of 31.76 (8) and 54.68 (6)°, respectively, with the pseudo-ring plane. The dihedral angle between the benzene rings is 85.71 (8)°. In the crystal, pairs of weak N-H⋯S inter-actions form inversion dimers and mediate a linear chain along [001].

Entities:  

Year:  2013        PMID: 23795092      PMCID: PMC3685073          DOI: 10.1107/S1600536813013159

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related compounds found in CSD (Allen, 2002 ▶) see: Al-abbasi et al. (2010 ▶); Cao et al. (1996 ▶). For the structure of the unsubstituted compound, see: Yamin & Yusof (2003 ▶). For details of the synthesis, see: Zhang et al. (2001 ▶).

Experimental

Crystal data

C15H14N2OS2 M = 302.42 Triclinic, a = 5.9131 (2) Å b = 9.5826 (3) Å c = 13.3149 (4) Å α = 96.729 (1)° β = 91.533 (1)° γ = 94.503 (1)° V = 746.46 (4) Å3 Z = 2 Mo Kα radiation μ = 0.35 mm−1 T = 308 K 0.7 × 0.34 × 0.24 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2010 ▶) T min = 0.917, T max = 1.0 11518 measured reflections 3285 independent reflections 2908 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.099 S = 1 3285 reflections 183 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813013159/qm2097sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813013159/qm2097Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813013159/qm2097Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H14N2OS2Z = 2
Mr = 302.42F(000) = 316
Triclinic, P1Dx = 1.345 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.9131 (2) ÅCell parameters from 7480 reflections
b = 9.5826 (3) Åθ = 5.0–54.1°
c = 13.3149 (4) ŵ = 0.35 mm1
α = 96.729 (1)°T = 308 K
β = 91.533 (1)°Prism, colourless
γ = 94.503 (1)°0.7 × 0.34 × 0.24 mm
V = 746.46 (4) Å3
Bruker APEXII CCD diffractometer2908 reflections with I > 2σ(I)
Multilayer optics monochromatorRint = 0.021
φ and ω scansθmax = 27.1°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Bruker, 2010)h = −7→7
Tmin = 0.917, Tmax = 1.0k = −12→11
11518 measured reflectionsl = −17→17
3285 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H-atom parameters constrained
wR(F2) = 0.099w = 1/[σ2(Fo2) + (0.0481P)2 + 0.2312P] where P = (Fo2 + 2Fc2)/3
S = 1(Δ/σ)max = 0.029
3285 reflectionsΔρmax = 0.19 e Å3
183 parametersΔρmin = −0.22 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008)
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.038 (4)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N20.6544 (2)0.96378 (13)0.72447 (9)0.0477 (3)
H20.60150.88750.68810.057*
S10.66478 (9)1.12397 (4)0.90198 (3)0.06291 (17)
C7−0.0806 (4)0.4643 (2)0.83445 (17)0.0745 (6)
H7−0.10070.3680.81330.089*
C4−0.0192 (3)0.75005 (17)0.89870 (12)0.0506 (3)
H40.00070.84620.92050.061*
C110.9002 (3)1.18452 (18)0.53854 (11)0.0519 (4)
H110.85521.21430.47760.062*
C10.5795 (2)0.98624 (14)0.81784 (10)0.0418 (3)
C20.3113 (3)0.77171 (15)0.78408 (11)0.0460 (3)
C5−0.1955 (3)0.6678 (2)0.93446 (15)0.0647 (5)
H5−0.29410.70870.98030.078*
C121.1161 (2)1.22405 (16)0.57927 (11)0.0453 (3)
C131.1798 (3)1.17840 (18)0.67070 (12)0.0518 (4)
H131.32441.20540.6990.062*
N10.4143 (2)0.88724 (12)0.84430 (9)0.0433 (3)
H10.37110.89950.90560.052*
O10.3658 (2)0.73896 (13)0.69735 (9)0.0679 (4)
C100.7507 (3)1.10043 (17)0.58862 (11)0.0509 (4)
H100.60511.07460.56110.061*
C30.1268 (2)0.68897 (15)0.83058 (11)0.0445 (3)
C141.0303 (3)1.09336 (18)0.71986 (12)0.0504 (4)
H141.07511.06240.78040.061*
C90.8147 (2)1.05463 (14)0.67869 (10)0.0428 (3)
S21.32148 (7)1.32969 (6)0.52237 (4)0.06877 (17)
C80.0945 (3)0.54539 (17)0.79760 (14)0.0604 (4)
H80.19060.50410.75080.072*
C6−0.2246 (3)0.5255 (2)0.90207 (17)0.0748 (6)
H6−0.3430.47060.92630.09*
C151.1792 (3)1.3752 (2)0.41292 (15)0.0684 (5)
H15A1.13271.29110.36840.103*
H15B1.28011.43570.37870.103*
H15C1.04821.42350.43260.103*
U11U22U33U12U13U23
N20.0555 (7)0.0429 (6)0.0431 (6)−0.0071 (5)0.0160 (5)0.0024 (5)
S10.0905 (3)0.0470 (2)0.0462 (2)−0.0230 (2)0.0246 (2)−0.00146 (16)
C70.0898 (14)0.0473 (9)0.0854 (14)−0.0157 (9)0.0241 (11)0.0132 (9)
C40.0487 (8)0.0492 (8)0.0547 (9)0.0025 (6)0.0078 (6)0.0100 (7)
C110.0503 (8)0.0663 (10)0.0393 (7)−0.0055 (7)0.0054 (6)0.0138 (7)
C10.0477 (7)0.0374 (7)0.0416 (7)0.0016 (5)0.0110 (6)0.0095 (5)
C20.0521 (8)0.0418 (7)0.0440 (7)−0.0021 (6)0.0100 (6)0.0065 (6)
C50.0528 (9)0.0740 (11)0.0698 (11)0.0033 (8)0.0211 (8)0.0161 (9)
C120.0423 (7)0.0493 (8)0.0451 (7)0.0007 (6)0.0133 (6)0.0085 (6)
C130.0373 (7)0.0671 (10)0.0525 (8)0.0004 (6)0.0061 (6)0.0148 (7)
N10.0512 (7)0.0402 (6)0.0384 (6)−0.0042 (5)0.0125 (5)0.0070 (5)
O10.0822 (9)0.0649 (7)0.0496 (7)−0.0246 (6)0.0248 (6)−0.0069 (5)
C100.0470 (8)0.0623 (9)0.0406 (7)−0.0116 (7)0.0048 (6)0.0043 (6)
C30.0480 (8)0.0426 (7)0.0433 (7)−0.0032 (6)0.0057 (6)0.0107 (6)
C140.0465 (8)0.0622 (9)0.0463 (8)0.0070 (7)0.0092 (6)0.0187 (7)
C90.0471 (7)0.0409 (7)0.0403 (7)0.0000 (6)0.0151 (6)0.0041 (5)
S20.0501 (3)0.0899 (4)0.0694 (3)−0.0149 (2)0.0089 (2)0.0348 (3)
C80.0725 (11)0.0450 (8)0.0630 (10)−0.0055 (7)0.0204 (8)0.0063 (7)
C60.0698 (12)0.0687 (12)0.0873 (14)−0.0163 (9)0.0230 (10)0.0250 (10)
C150.0701 (11)0.0769 (12)0.0640 (11)0.0050 (9)0.0201 (9)0.0291 (9)
N2—C11.3303 (18)C5—H50.93
N2—C91.4331 (17)C12—C131.393 (2)
N2—H20.86C12—S21.7635 (14)
S1—C11.6643 (15)C13—C141.384 (2)
C7—C61.370 (3)C13—H130.93
C7—C81.380 (2)N1—H10.86
C7—H70.93C10—C91.378 (2)
C4—C31.381 (2)C10—H100.93
C4—C51.386 (2)C3—C81.391 (2)
C4—H40.93C14—C91.380 (2)
C11—C121.380 (2)C14—H140.93
C11—C101.386 (2)S2—C151.778 (2)
C11—H110.93C8—H80.93
C1—N11.3890 (17)C6—H60.93
C2—O11.2193 (17)C15—H15A0.96
C2—N11.3783 (18)C15—H15B0.96
C2—C31.4891 (19)C15—H15C0.96
C5—C61.377 (3)
C1—N2—C9126.20 (12)C2—N1—H1116.1
C1—N2—H2116.9C1—N1—H1116.1
C9—N2—H2116.9C9—C10—C11120.90 (14)
C6—C7—C8120.07 (17)C9—C10—H10119.5
C6—C7—H7120C11—C10—H10119.5
C8—C7—H7120C4—C3—C8119.70 (14)
C3—C4—C5119.86 (15)C4—C3—C2122.95 (13)
C3—C4—H4120.1C8—C3—C2117.22 (13)
C5—C4—H4120.1C9—C14—C13119.77 (14)
C12—C11—C10119.89 (14)C9—C14—H14120.1
C12—C11—H11120.1C13—C14—H14120.1
C10—C11—H11120.1C10—C9—C14119.61 (13)
N2—C1—N1116.19 (12)C10—C9—N2117.94 (13)
N2—C1—S1124.91 (11)C14—C9—N2122.42 (13)
N1—C1—S1118.88 (10)C12—S2—C15104.62 (8)
O1—C2—N1122.34 (13)C7—C8—C3119.92 (16)
O1—C2—C3121.47 (13)C7—C8—H8120
N1—C2—C3116.18 (12)C3—C8—H8120
C6—C5—C4119.95 (16)C7—C6—C5120.50 (16)
C6—C5—H5120C7—C6—H6119.8
C4—C5—H5120C5—C6—H6119.8
C11—C12—C13119.09 (13)S2—C15—H15A109.5
C11—C12—S2124.05 (12)S2—C15—H15B109.5
C13—C12—S2116.87 (11)H15A—C15—H15B109.5
C14—C13—C12120.74 (14)S2—C15—H15C109.5
C14—C13—H13119.6H15A—C15—H15C109.5
C12—C13—H13119.6H15B—C15—H15C109.5
C2—N1—C1127.82 (12)
C9—N2—C1—N1176.58 (13)O1—C2—C3—C830.6 (2)
C9—N2—C1—S1−2.0 (2)N1—C2—C3—C8−150.00 (15)
C3—C4—C5—C60.0 (3)C12—C13—C14—C9−0.8 (2)
C10—C11—C12—C13−0.1 (2)C11—C10—C9—C140.2 (2)
C10—C11—C12—S2179.62 (12)C11—C10—C9—N2−177.77 (14)
C11—C12—C13—C140.7 (2)C13—C14—C9—C100.4 (2)
S2—C12—C13—C14−179.05 (12)C13—C14—C9—N2178.27 (13)
O1—C2—N1—C13.7 (3)C1—N2—C9—C10−124.24 (17)
C3—C2—N1—C1−175.71 (13)C1—N2—C9—C1457.8 (2)
N2—C1—N1—C2−3.1 (2)C11—C12—S2—C153.27 (17)
S1—C1—N1—C2175.56 (12)C13—C12—S2—C15−177.03 (13)
C12—C11—C10—C9−0.4 (2)C6—C7—C8—C31.1 (3)
C5—C4—C3—C80.6 (2)C4—C3—C8—C7−1.2 (3)
C5—C4—C3—C2176.20 (15)C2—C3—C8—C7−177.03 (17)
O1—C2—C3—C4−145.13 (17)C8—C7—C6—C5−0.5 (4)
N1—C2—C3—C434.3 (2)C4—C5—C6—C7−0.1 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2···O10.861.932.6250 (16)137
N1—H1···S1i0.862.613.4358 (12)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2⋯O10.861.932.6250 (16)137
N1—H1⋯S1i 0.862.613.4358 (12)161

Symmetry code: (i) .

  3 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  1-Benzoyl-3-(4-hy-droxy-phen-yl)thio-urea.

Authors:  Aisha A Al-Abbasi; Siew San Tan; Mohammad B Kassim
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-13
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.