Literature DB >> 23795091

1-Ethyl-2-phenyl-3-[2-(tri-methyl-sil-yl)ethyn-yl]-1H-indole.

Iaroslav Baglai1, Valérie Maraval, Carine Duhayon, Remi Chauvin.   

Abstract

The title compound, C21H23NSi, was synthesized by Sonogashira-type reaction of 1-ethyl-3-iodo-2-phenyl-1H-indole with tri-methyl-silyl-acetyl-ene. The indole ring system is nearly planar [maximum atomic deviation = 0.0244 (15) Å] and is oriented at a dihedral angle of 51.48 (4)° with respect to the phenyl ring. The supramolecular aggregation is completed by weak C-H⋯π inter-actions of the methylene and phenyl groups with the benzene and pyrrole rings of the indole ring system. The methyl groups of the tri-methyl-silyl unit are equally disordered over two sets of sites.

Entities:  

Year:  2013        PMID: 23795091      PMCID: PMC3685072          DOI: 10.1107/S1600536813012671

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to indoles, see: Huang et al. (2004 ▶); Seferoğlu et al. (2007a ▶,b ▶). For the synthesis and properties of indoles, see: Ruiz et al. (2012 ▶); Shiri (2012 ▶); Hussain et al. (2011 ▶); Prateeptongkum et al. (2010 ▶); Rives et al. (2012 ▶).

Experimental

Crystal data

C21H23NSi M = 317.51 Monoclinic, a = 12.6271 (6) Å b = 9.3928 (5) Å c = 16.6616 (8) Å β = 111.954 (2)° V = 1832.83 (16) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 100 K 0.20 × 0.20 × 0.06 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.90, T max = 0.99 26426 measured reflections 4320 independent reflections 3254 reflections with I > 2.0σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.039 S = 1.12 3032 reflections 235 parameters 6 restraints H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: CAMERON (Watkin et al., 1996 ▶); software used to prepare material for publication: CRYSTALS. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813012671/xu5700sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813012671/xu5700Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813012671/xu5700Isup3.cdx Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813012671/xu5700Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H23NSiF(000) = 680
Mr = 317.51Dx = 1.151 Mg m3
Monoclinic, P21/nMelting point: 359 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 12.6271 (6) ÅCell parameters from 9299 reflections
b = 9.3928 (5) Åθ = 3–28°
c = 16.6616 (8) ŵ = 0.13 mm1
β = 111.954 (2)°T = 100 K
V = 1832.83 (16) Å3Planar, colourless
Z = 40.20 × 0.20 × 0.06 mm
Bruker Kappa APEXII diffractometer3254 reflections with I > 2.0σ(I)
Graphite monochromatorRint = 0.032
φ and ω scansθmax = 28.1°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −16→16
Tmin = 0.90, Tmax = 0.99k = −12→12
26426 measured reflectionsl = −22→21
4320 independent reflections
Refinement on FPrimary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038H-atom parameters constrained
wR(F2) = 0.039 [weight] = 1.0/[A0*T0(x) + A1*T1(x) ··· + An-1]*Tn-1(x)] where Ai are 0.191, 0.134 and 0.621E-01, and x = F /Fmax
S = 1.12(Δ/σ)max = 0.001
3032 reflectionsΔρmax = 0.31 e Å3
235 parametersΔρmin = −0.30 e Å3
6 restraints
Refinement. Structure was refined by full-matrix least-squares procedures on F using the programs of the PC version of CRYSTALS, with 3032 reflexions [I>3.0σ(I)].
xyzUiso*/UeqOcc. (<1)
N10.99268 (10)0.72549 (13)0.49251 (8)0.0196
C20.93192 (11)0.79040 (15)0.53618 (9)0.0184
C30.98715 (12)0.76670 (15)0.62446 (9)0.0195
C41.08714 (12)0.68318 (16)0.63574 (9)0.0207
C51.08685 (11)0.65774 (16)0.55223 (9)0.0211
C61.17008 (13)0.57357 (17)0.53885 (10)0.0267
C71.25572 (13)0.51899 (18)0.61168 (11)0.0299
C81.25924 (13)0.54708 (17)0.69552 (10)0.0284
C91.17547 (13)0.62798 (16)0.70832 (10)0.0243
C100.96037 (13)0.71346 (17)0.39867 (9)0.0241
C111.03390 (14)0.80491 (19)0.36501 (10)0.0309
C120.82652 (11)0.87255 (15)0.49367 (9)0.0183
C130.73271 (13)0.84517 (17)0.51658 (11)0.0261
C140.63450 (13)0.92593 (18)0.48225 (12)0.0315
C150.62723 (13)1.03523 (16)0.42414 (11)0.0278
C160.71982 (12)1.06377 (16)0.40118 (10)0.0236
C170.81897 (12)0.98331 (16)0.43583 (9)0.0206
C180.95193 (12)0.81975 (15)0.69075 (9)0.0209
C190.91972 (13)0.86562 (16)0.74527 (9)0.0235
Si200.85785 (3)0.94562 (4)0.81844 (3)0.0218
C230.9113 (3)1.1387 (3)0.8372 (2)0.02400.5000
C2300.9514 (3)1.0854 (4)0.8847 (2)0.03010.5000
C2200.8439 (3)0.7986 (4)0.8949 (2)0.02930.5000
C220.9054 (3)0.8510 (4)0.9200 (2)0.03020.5000
C2100.7149 (4)1.0146 (5)0.7538 (3)0.04640.5000
C210.7003 (3)0.9480 (5)0.7620 (3)0.03450.5000
H611.16810.55580.48250.0324*
H711.31390.46040.60470.0374*
H811.32030.50840.74440.0353*
H911.17670.64490.76470.0307*
H1020.96870.61330.38550.0301*
H1010.88130.74250.37100.0299*
H1111.00990.79140.30420.0467*
H1121.11320.77870.39250.0468*
H1131.02300.90440.37560.0470*
H1310.73770.76800.55650.0325*
H1410.57030.90700.49760.0385*
H1510.55911.08870.40170.0332*
H1610.71561.13790.36130.0296*
H1710.88311.00450.42070.0257*
H2110.68220.99880.71070.0406*0.5000
H2120.66710.99200.79690.0406*0.5000
H2130.67270.85550.74970.0406*0.5000
H21010.66980.94120.72110.0595*0.5000
H21020.68161.05160.79050.0595*0.5000
H21030.72121.08590.71710.0595*0.5000
H2310.88691.18730.78480.0306*0.5000
H2320.99071.13810.86130.0306*0.5000
H2330.88331.18380.87490.0306*0.5000
H23010.95841.15790.84890.0395*0.5000
H23021.02301.04730.91580.0395*0.5000
H23030.92011.12200.92280.0395*0.5000
H2210.87820.75810.91020.0387*0.5000
H2220.98480.85000.94420.0387*0.5000
H2230.87730.89570.95780.0387*0.5000
H22010.79660.72650.86250.0367*0.5000
H22020.91600.76180.92600.0367*0.5000
H22030.81310.83650.93300.0367*0.5000
U11U22U33U12U13U23
N10.0187 (5)0.0257 (6)0.0131 (6)0.0054 (5)0.0045 (4)−0.0013 (5)
C20.0192 (6)0.0204 (7)0.0163 (7)−0.0005 (5)0.0073 (5)−0.0032 (5)
C30.0211 (6)0.0193 (7)0.0174 (7)−0.0013 (5)0.0064 (5)−0.0019 (5)
C40.0214 (7)0.0211 (7)0.0180 (7)−0.0004 (5)0.0054 (5)−0.0022 (5)
C50.0186 (6)0.0257 (7)0.0161 (7)0.0021 (6)0.0031 (5)−0.0008 (6)
C60.0232 (7)0.0334 (9)0.0225 (8)0.0066 (6)0.0074 (6)−0.0021 (6)
C70.0214 (7)0.0335 (9)0.0317 (9)0.0081 (6)0.0063 (6)−0.0017 (7)
C80.0212 (7)0.0299 (8)0.0247 (8)0.0040 (6)−0.0022 (6)0.0017 (7)
C90.0258 (7)0.0250 (7)0.0160 (7)−0.0006 (6)0.0007 (5)−0.0006 (6)
C100.0253 (7)0.0314 (8)0.0133 (7)0.0077 (6)0.0044 (6)−0.0040 (6)
C110.0327 (8)0.0436 (10)0.0181 (8)0.0098 (7)0.0114 (6)0.0030 (7)
C120.0172 (6)0.0197 (6)0.0164 (6)0.0002 (5)0.0045 (5)−0.0045 (5)
C130.0244 (7)0.0233 (7)0.0341 (8)0.0027 (6)0.0147 (6)0.0031 (6)
C140.0220 (7)0.0311 (9)0.0460 (10)0.0015 (6)0.0179 (7)0.0030 (7)
C150.0198 (7)0.0257 (8)0.0353 (9)0.0051 (6)0.0073 (6)−0.0019 (6)
C160.0228 (7)0.0241 (7)0.0199 (7)−0.0001 (6)0.0034 (5)−0.0004 (6)
C170.0171 (6)0.0275 (7)0.0161 (7)−0.0011 (5)0.0049 (5)−0.0018 (6)
C180.0239 (7)0.0195 (7)0.0179 (7)−0.0017 (5)0.0061 (6)−0.0004 (5)
C190.0300 (7)0.0220 (7)0.0194 (7)−0.0014 (6)0.0102 (6)−0.0011 (6)
Si200.02245 (19)0.0247 (2)0.0181 (2)0.00257 (17)0.00724 (15)−0.00369 (17)
C230.0307 (15)0.0225 (15)0.0230 (16)−0.0008 (13)0.0148 (13)−0.0054 (13)
C2300.0341 (17)0.0319 (18)0.0258 (18)−0.0038 (14)0.0130 (14)−0.0090 (15)
C2200.0286 (16)0.0391 (19)0.0237 (17)−0.0033 (15)0.0139 (14)−0.0031 (14)
C220.0373 (18)0.0333 (18)0.0224 (17)−0.0011 (16)0.0139 (15)0.0016 (14)
C2100.037 (2)0.031 (2)0.050 (3)0.009 (2)−0.0083 (19)−0.012 (2)
C210.0283 (18)0.036 (2)0.039 (2)−0.001 (2)0.0127 (15)0.000 (2)
N1—C21.3811 (17)C15—H1510.945
N1—C51.3872 (18)C16—C171.390 (2)
N1—C101.4653 (18)C16—H1610.951
C2—C31.3901 (19)C17—H1710.954
C2—C121.4709 (19)C18—C191.205 (2)
C3—C41.438 (2)C19—Si201.8366 (15)
C3—C181.426 (2)Si20—C231.920 (3)
C4—C51.410 (2)Si20—C2301.834 (3)
C4—C91.402 (2)Si20—C2201.930 (3)
C5—C61.398 (2)Si20—C221.804 (3)
C6—C71.387 (2)Si20—C2101.839 (4)
C6—H610.944Si20—C211.856 (4)
C7—C81.406 (2)C23—H2310.930
C7—H710.960C23—H2320.930
C8—C91.382 (2)C23—H2330.930
C8—H810.959C230—H23010.930
C9—H910.946C230—H23020.930
C10—C111.518 (2)C230—H23030.930
C10—H1020.981C220—H22010.930
C10—H1010.969C220—H22020.930
C11—H1110.951C220—H22030.930
C11—H1120.965C22—H2210.930
C11—H1130.971C22—H2220.930
C12—C131.3974 (19)C22—H2230.930
C12—C171.397 (2)C210—H21010.930
C13—C141.382 (2)C210—H21020.930
C13—H1310.970C210—H21030.930
C14—C151.390 (2)C21—H2110.930
C14—H1410.953C21—H2120.930
C15—C161.385 (2)C21—H2130.930
C2—N1—C5108.70 (11)C16—C17—H171119.9
C2—N1—C10127.47 (11)C3—C18—C19178.42 (15)
C5—N1—C10123.51 (11)C18—C19—Si20173.57 (14)
N1—C2—C3109.21 (12)C19—Si20—C23106.48 (10)
N1—C2—C12123.97 (12)C19—Si20—C230110.76 (12)
C3—C2—C12126.81 (12)C19—Si20—C220108.16 (11)
C2—C3—C4107.12 (12)C23—Si20—C220132.96 (15)
C2—C3—C18125.82 (13)C230—Si20—C220108.21 (17)
C4—C3—C18127.04 (13)C19—Si20—C22110.27 (12)
C3—C4—C5106.57 (12)C23—Si20—C22109.80 (16)
C3—C4—C9133.70 (14)C230—Si20—C2282.80 (18)
C5—C4—C9119.73 (13)C19—Si20—C210108.84 (18)
C4—C5—N1108.38 (12)C230—Si20—C210111.74 (18)
C4—C5—C6121.89 (13)C220—Si20—C210109.0 (2)
N1—C5—C6129.71 (13)C22—Si20—C210129.2 (2)
C5—C6—C7117.15 (14)C19—Si20—C21108.08 (15)
C5—C6—H61121.1C23—Si20—C21108.43 (18)
C7—C6—H61121.8C230—Si20—C21128.55 (18)
C6—C7—C8121.64 (14)C220—Si20—C2189.87 (18)
C6—C7—H71119.2C22—Si20—C21113.51 (18)
C8—C7—H71119.1Si20—C23—H231109.7
C7—C8—C9120.98 (14)Si20—C23—H232108.8
C7—C8—H81119.3H231—C23—H232109.5
C9—C8—H81119.7Si20—C23—H233109.9
C4—C9—C8118.56 (14)H231—C23—H233109.5
C4—C9—H91120.4H232—C23—H233109.5
C8—C9—H91121.0Si20—C230—H2301109.5
N1—C10—C11112.70 (13)Si20—C230—H2302109.4
N1—C10—H102107.6H2301—C230—H2302109.5
C11—C10—H102109.2Si20—C230—H2303109.5
N1—C10—H101108.2H2301—C230—H2303109.5
C11—C10—H101109.2H2302—C230—H2303109.5
H102—C10—H101110.0Si20—C220—H2201109.7
C10—C11—H111108.8Si20—C220—H2202108.8
C10—C11—H112110.5H2201—C220—H2202109.5
H111—C11—H112109.4Si20—C220—H2203110.0
C10—C11—H113109.3H2201—C220—H2203109.5
H111—C11—H113108.2H2202—C220—H2203109.5
H112—C11—H113110.6Si20—C22—H221109.0
C2—C12—C13118.60 (13)Si20—C22—H222109.8
C2—C12—C17122.61 (12)H221—C22—H222109.5
C13—C12—C17118.64 (13)Si20—C22—H223109.6
C12—C13—C14120.46 (15)H221—C22—H223109.5
C12—C13—H131118.7H222—C22—H223109.5
C14—C13—H131120.8Si20—C210—H2101109.6
C13—C14—C15120.59 (14)Si20—C210—H2102109.4
C13—C14—H141120.5H2101—C210—H2102109.5
C15—C14—H141118.9Si20—C210—H2103109.4
C14—C15—C16119.49 (14)H2101—C210—H2103109.5
C14—C15—H151118.8H2102—C210—H2103109.5
C16—C15—H151121.7Si20—C21—H211108.7
C15—C16—C17120.15 (14)Si20—C21—H212109.7
C15—C16—H161120.2H211—C21—H212109.5
C17—C16—H161119.7Si20—C21—H213110.0
C12—C17—C16120.67 (13)H211—C21—H213109.5
C12—C17—H171119.5H212—C21—H213109.5
D—H···AD—HH···AD···AD—H···A
C10—H102···Cg5i0.982.663.3512 (18)128
C16—H161···Cg5ii0.952.793.5122 (17)133
C17—H171···Cg4ii0.952.813.4515 (17)125
Table 1

Hydrogen-bond geometry (Å, °)

Cg4 and Cg5 are the centroids of the pyrrole and benzene rings, respectively, of indole ring system.

D—H⋯A D—HH⋯A DA D—H⋯A
C10—H102⋯Cg5i 0.982.663.3512 (18)128
C16—H161⋯Cg5ii 0.952.793.5122 (17)133
C17—H171⋯Cg4ii 0.952.813.4515 (17)125

Symmetry codes: (i) ; (ii) .

  4 in total

Review 1.  Indoles in multicomponent processes (MCPs).

Authors:  Morteza Shiri
Journal:  Chem Rev       Date:  2012-03-05       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Efficient synthesis of biologically interesting 3,4-diaryl-substituted succinimides and maleimides: application of iron-catalyzed carbonylations.

Authors:  Saisuree Prateeptongkum; Katrin Marie Driller; Ralf Jackstell; Anke Spannenberg; Matthias Beller
Journal:  Chemistry       Date:  2010-08-16       Impact factor: 5.236

4.  Highly π electron-rich macro-aromatics: bis(p-aminophenyl)-carbo-benzenes and their DBA acyclic references.

Authors:  Arnaud Rives; Iaroslav Baglai; Volodymyr Malytskyi; Valérie Maraval; Nathalie Saffon-Merceron; Zoia Voitenko; Remi Chauvin
Journal:  Chem Commun (Camb)       Date:  2012-07-27       Impact factor: 6.222

  4 in total

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